Transcript Information: S_Transcript_410392.p1


Annotated TAIR IDAT5G17430.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)BBM
Annotation TypeOrtholog
Chromosome Positionchr5:5742542-5745568 | Reverse length=584
E-Value3.7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24871963771197
Replicate 20.20619429493005
Replicate 30
Condition 2: 8 Hour
Replicate 10.19930271324423
Replicate 20.13938846504503
Replicate 30
Condition 3: 24 Hour
Replicate 10.068052596543907
Replicate 20.070603774381145
Replicate 30.078573347056436


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_410392.p1 GENE.S_Transcript_410392~~S_Transcript_410392.p1 ORF type:5prime_partial len:321 (+),score=63.66,AP2|PF00847.16|6.5e-10,AP2|PF00847.16|5.1e+03 S_Transcript_410392:3-965(+)
TTTGTAGCTGCTATTAGAAGGAAGAGTAGTGGATTCTCTAGGGGTGCATCCATTTATCGTGGTGTGACAAGACACCACCAACATGGAAGATGGCAAGCTAGGATTGGAAGGGTAGCGGGAAACAAGGATCTCTACTTGGGAACATTCAGCACGGAAGAAGAAGCAGCGGAAGCATATGACATAGCAGCCATAAAGTTTAGAGGCCTAAATGCAGTGACCAACTTCGACATGAGCCGATACGACGTGAAGGCGATCCTAGAGAGCAACACACTTCCTATAGGAGGAGGAGCAGCCAAGAGGCTTAAGGAAGCCCAAGCAATAGAATCTTCTAGAAAGAGGGAAGAAATGATTGCCCTAACCAATAGCACCTTCCAATATGGTGGCAGCGGTTCGAGTTCAACCAGGTATGGTGGGTCCCACCATCACCACCACCACCAAGCAACTGCTTATCCTTTGCTTCCATATCACCACCATCAAGAGCAACAACCTCAACCTTTGCTAACCCTACAAAATAACCATGGTCAAGATAACAACAATATTTCTTTGTCTCATTACTCATCACAAGAAGCTCAGTTCCTTCAGTTATACCAACAACAACAACAGCAGCAACAACAATCAAGTTACTCATCAAACCCTAGCATGTACAACAATTATCTTCAGTCTAACCCAGCTTTGCTACATGGGCTTATGAGTATGGGCTCCAACGATAATAGGAGTTATAGTGGTAGTGGCTACAATTTGGGAAGTGGTAGTGGGCCCGGGATTAATGGGATGGGGTCCACCTCCACGACGAGCAATGCTGTGGGGCCAGGTGATCATGAGCCCCTTGCTTTGGTGAAGGTTGACTATGACATGCCATCGGCCGCCGGCGGTGGCAGTGGAGGTGGTGGTTATGGTGGTTGGTCTACAGATTCAGTCCAAGGCCCTAACACTGGGGTTTTTGCTATGTGGAATGACTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_410392.p1 GENE.S_Transcript_410392~~S_Transcript_410392.p1 ORF type:5prime_partial len:321 (+),score=63.66,AP2|PF00847.16|6.5e-10,AP2|PF00847.16|5.1e+03 S_Transcript_410392:3-965(+)
FVAAIRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQAIESSRKREEMIALTNSTFQYGGSGSSSTRYGGSHHHHHHQATAYPLLPYHHHQEQQPQPLLTLQNNHGQDNNNISLSHYSSQEAQFLQLYQQQQQQQQQSSYSSNPSMYNNYLQSNPALLHGLMSMGSNDNRSYSGSGYNLGSGSGPGINGMGSTSTTSNAVGPGDHEPLALVKVDYDMPSAAGGGSGGGGYGGWSTDSVQGPNTGVFAMWNDS*

Click here to download the sequence:
Link to NCBI Protein BLAST