Transcript Information: S_Transcript_410441.p1


Annotated TAIR IDAT5G59600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24011315-24012919 | Reverse length=534
E-Value2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38945855466118
Replicate 20.10762336369519
Replicate 30.44982283130733
Condition 2: 8 Hour
Replicate 10.20805258845983
Replicate 20.54565484487138
Replicate 30.31193923324363
Condition 3: 24 Hour
Replicate 10.10656040727119
Replicate 20.22111035684241
Replicate 30.12303436295179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_410441.p1 GENE.S_Transcript_410441~~S_Transcript_410441.p1 ORF type:internal len:205 (-),score=41.87,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|4.5e+03,PPR|PF01535.16|0.00058,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.043,PPR|PF01535.16|5.7e+02,PPR_2|PF13041.2|0.0047,PPR_2|PF13041.2|2.2e-11,PPR_2|PF13041.2|0.069,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|4.7,PPR_1|PF12854.3|3e-05,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|5.9e-05,PPR_1|PF12854.3|1.6e+02,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.2e+02 S_Transcript_410441:1-612(-)
CTGTTTCGGTTGATGCGTGTTAATGGGATTGAGCCTGATGTAGTGTCCTGGACTTCTATCATATCCGGGCTGGTGAAGAATTTTCAGTATAGTGAAGCTTTTGTGACATTTCGCAAAATGTTGGATTCTAGGCTTTGCCCTAATGGGAATACAATTAGCTGTCTCTTGTCTGCTTGTGCTAATGTGGCCAATGTAACGCATGGGAAGGAGATACATAAGTATGCATTGGTGAATGAACTTGAGCAGGATATATATGTGAGGAGTGCTCTTATTGACATGTATGCTAAGTGTGGCTGTATATACCAAGCATCAATGTTGTTTGAGAAGATGACTAGACGGAATACTCCTACTTGGAACTCAATGATCTTTGGATATGCTAATCATGGTTTTTGTAACAAGGCAATTGAACTTTTCAAGAGGATGGAAGTTGAGGGGAGAGAGAAACTTGATCACCTGACTTTCACTGCAGCTCTAATGGCCTGTAGTCATGGTGGCATGATGGAACTTGGGAAAACCTTGTTCAAATCAATGCAAGAAACTTACAACATTAGGCCAAGACTCGAGCATTATGCATGTCTGGTGGATCTTCTTGGTCGAGCAGGAAAGTTAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_410441.p1 GENE.S_Transcript_410441~~S_Transcript_410441.p1 ORF type:internal len:205 (-),score=41.87,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|4.5e+03,PPR|PF01535.16|0.00058,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.043,PPR|PF01535.16|5.7e+02,PPR_2|PF13041.2|0.0047,PPR_2|PF13041.2|2.2e-11,PPR_2|PF13041.2|0.069,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|4.7,PPR_1|PF12854.3|3e-05,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|5.9e-05,PPR_1|PF12854.3|1.6e+02,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.2e+02 S_Transcript_410441:1-612(-)
LFRLMRVNGIEPDVVSWTSIISGLVKNFQYSEAFVTFRKMLDSRLCPNGNTISCLLSACANVANVTHGKEIHKYALVNELEQDIYVRSALIDMYAKCGCIYQASMLFEKMTRRNTPTWNSMIFGYANHGFCNKAIELFKRMEVEGREKLDHLTFTAALMACSHGGMMELGKTLFKSMQETYNIRPRLEHYACLVDLLGRAGKLM

Click here to download the sequence:
Link to NCBI Protein BLAST