Transcript Information: S_Transcript_410537.p1


Annotated TAIR IDAT5G42270.1
Annotated Gene NameFtsH extracellular protease family
Annotated Gene Symbol(s)VAR1, FTSH5
Annotation TypeOrtholog
Chromosome Positionchr5:16902659-16905102 | Forward length=704
E-Value3.1E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19425548346847
Replicate 20.48312677863171
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.15559012850351
Condition 3: 24 Hour
Replicate 10
Replicate 20.82714640789589
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_410537.p1 GENE.S_Transcript_410537~~S_Transcript_410537.p1 ORF type:internal len:137 (+),score=3.26,Peptidase_M41|PF01434.14|7.4e-52 S_Transcript_410537:1-408(+)
CGCATCGTGGCGGGCCCCGAGAAGAACGGCGCGATGATGAGCGAGCAGAAGAAGAAGCTTGTGGCATACCACGAAGCAGGCCACGCCCTTGTCGGCGCCCTCATGCCAGAATACGACCCGGTCACCAAGATCTCGATCGTGCCGCGCGGCGCCGCGGGCGGCATCACGTTCTTTGCGCCGAACGAGGAGCGCCTGGAGAGCGGGCTCTACTCCAAGACGTACCTGGAGAACCAGATGGCGGTGGCCATGGGCGGCCGCATCGCTGAGGAGCTCATCTTTGGCGAGGACAACATCACCACCGGCGCCGGCGGCGACTTCCAGCAGGTGACGCGGACGGCGCGCATGATGATCGAGCAGATGGGCTTCAGCGAGAAGCTCGGCCAGGTCGCGTGGGGTGGCGGCGGCGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_410537.p1 GENE.S_Transcript_410537~~S_Transcript_410537.p1 ORF type:internal len:137 (+),score=3.26,Peptidase_M41|PF01434.14|7.4e-52 S_Transcript_410537:1-408(+)
RIVAGPEKNGAMMSEQKKKLVAYHEAGHALVGALMPEYDPVTKISIVPRGAAGGITFFAPNEERLESGLYSKTYLENQMAVAMGGRIAEELIFGEDNITTGAGGDFQQVTRTARMMIEQMGFSEKLGQVAWGGGGG

Click here to download the sequence:
Link to NCBI Protein BLAST