Transcript Information: S_Transcript_41056.p1


Annotated TAIR IDAT2G36390.1
Annotated Gene Namestarch branching enzyme 2.1
Annotated Gene Symbol(s)SBE2.1, BE3
Annotation TypeOrtholog
Chromosome Positionchr2:15264283-15269940 | Forward length=858
E-Value7.6E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.638967687009
Replicate 220.969817263767
Replicate 316.955418657504
Condition 2: 8 Hour
Replicate 127.516632667268
Replicate 225.980211323554
Replicate 331.187933707749
Condition 3: 24 Hour
Replicate 119.177190345429
Replicate 216.397319896251
Replicate 319.642974674952


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41056.p1 GENE.S_Transcript_41056~~S_Transcript_41056.p1 ORF type:complete len:868 (+),score=182.60,Alpha-amylase_C|PF02806.14|7.1e+03,Alpha-amylase_C|PF02806.14|1.7e-25,CBM_48|PF02922.14|4.6e-20,Alpha-amylase|PF00128.20|5.4e-10,Alpha-amylase|PF00128.20|0.64 S_Transcript_41056:410-3013(+)
ATGAACAGCTCAGCAAGTATTACAGGTGTAATTTCTCTTGGGTCTTTGCTGCCTTCATCTACTAATCTCAAAAGGGGTTCAGCAAGCAACAACTCAATTTTGAGTCAACTGTATGCAGTGAACAGGAGTTCAGAAAAATTACCTAGGCATCTTATCTCTCATTCTAAGTCAATAGTTAAAGTATCTAGGAGGGGGAAGCACTGTCCTGCTATCTCAGCCGTTTTGGCTGAGAGTAATCAAGAAATGGCAAGTGATGAAGTGGATACTGAAACTCTGGGAATCCTGGGTGTGGATCCAGCCATAGAACCTTATGAAGATCATTTCAGATCCAGAGTTAAGAGATATGTAGATCAAAAAGAGCTCATTGAGAAATATGAAGGTGGTCTTGAAGAGTTTGCACAAGGATACCTAAAACTCGGTTTTAACAGAGAAGAAGACAGCATTGTGTATCGCGAGTGGGCCCCTGCTGCTCAGGAAGCACAACTTATCGGGGACTTCAATGGATGGAATGGTGCCAACCATAGTATGGAAAAGAACCAGTTTGGTGTTTGGAGCATTAGGATTCAAGATACTGGTGGAAAACCTGCTATACCTCACAACTCAAGAGTCAAGTTTCGGTTCAAGTATGGAGATGGAGTTTGGGTTGATCGTCTTCCTGCATGGATCAAATATGCCACTGTAGACCCAACAAGATTTGCAGCACCTTATGATGGTGTATACTGGGATCCCTCTCCTGAAGAAAGGTACCAATTTCAGCATCCTCGTCCTCCAAAACCAAAAGCTCCTAGAATATATGAGGCCCATGTTGGAATGAGTGGCTCAGAACCTCGTGTGAATACATATAGGGAATTTGCAGACTATGTTTTGCCTCGTATCAAGGCAAATAACTACAACACAGTGCAGTTGATGGCTGTGATGGAACATTCCTACTATGCTTCATTTGGATACCATGTGACGAACTTCTTTGCTGTTAGCAGTAGATCTGGAAGTCCTGAGGACCTCAAATATCTTATTGACAAGGCTCACAGCTTAGGTTTACGAGTATTGATGGATGTTGTTCATAGTCATGCCAGTAACAACATCACTGATGGTCTTAATGGTTTTGATGTTGGCCAAAGTTCACAGGATTCCTATTTCCATACTGGAGAACATGGTTACCATAAGTTGTGGGATAGTAGATTGTTCAATTATGCCAACTGGGAAGTCCTTCGGTTCCTTTTATCCAATTTGAGGTGGTGGCTTGAAGAGTATAGATTTGATGGATTTCGTTTTGATGGAGTGACTTCCATGCTATATCATCATCATGGAATTAACATGGCCTTTACAGGGAATTATGATGAGTATTTCAGTGAGGCAACAGATGTTGATGCTGTGGTTTATCTGATGCTGGCCAATCGTTTAGTTCATAACATCTTTCCAGAAGCAACAGTGATTGCAGAAGATGTGTCTGGTATGCCAGGATTATGTCGCCCTGTTTCCGAGGGGGGAGTTGGCTTTGACTATCGTCTGGCAATGGCTATTCCGGATAAGTGGATTGACTACTTGAAGAACAAGAAGGATGAAGAGTGGTCTATGAATGAAATTATGTGTAGTTTAACAAACAGAAGATACACTGAGAAGTGTGTGGCTTATGCAGAGAGTCATGACCAGGCCATTGTAGGTGACAAAACTGTAGCATTTTTCCTAATGGACCAAGAAATGTATACAGGAATGTCCTGCTTGACAGAAGCTTCTCCTGCAATTGAGAGAGGGATTGCTCTTCACAAGATGATACATTGTATTACAATGGCCCTGGGAGGAGAAGGCTACCTTAACTTCATGGGTAATGAGTTTGGGCATCCTGAGTGGATTGACTTTCCCAGAGAAGGAAATGGTTGGAGTTACGAAAAATGCAGACGCCAATGGGACCTGGTTGATACAGATCATCTGAGATATAAGTCCATGAATGCTTTTGATAGTGCCATGAATTTGCTGGATGAAAAGTTCTCGTTTCTCTCTTCAACAAAACAGATCGTCAGCAGTGCACATGATGAAGACAAGGTTATTGTGTTTGAACGAGGTGATTTAGTATTTGTCTTCAACTTCCATCCAGAGAATACATATGAGGGTTACAAAATTGGGTGTGACCTGCCTGGAAAGTATCGTGTTGCATTAGATAGTGATGCTTGGGCGTTTGGTGGAAGAGGAAGGGTGGGTCATGATGTTGATCATTTCACAACTCCTGAAGGAATACCAGGGGTTCCTGAGACGAATTTCAACAACCGACCTAATTCTTTTAAGGTCCTATCACCACCTCGTACATGTGTGGCGTACTATAGAGTTGAAGACTATCCTGAAGAAAGCATGGGATCCACCACTGTTGCCAGTATCCTTGAAGAAGAGGTAGGAGAAAAGGATGGTGGTAACTTAGAAAACCCAACTCCTGTGGAAGACAAATTAGGTCCAAGCATTGAGGATATATCTGCGACTGAAGAGGTCAATGACAGCGAAACTCTTGATGATATCCAGAATTTTAATCCCTTCAGTTCTTGCAACTTTGAACTTGGTATACCTTTATTATCATCAATGTATTTCCCGTTAGTTCGCAGTTATCTTTTCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41056.p1 GENE.S_Transcript_41056~~S_Transcript_41056.p1 ORF type:complete len:868 (+),score=182.60,Alpha-amylase_C|PF02806.14|7.1e+03,Alpha-amylase_C|PF02806.14|1.7e-25,CBM_48|PF02922.14|4.6e-20,Alpha-amylase|PF00128.20|5.4e-10,Alpha-amylase|PF00128.20|0.64 S_Transcript_41056:410-3013(+)
MNSSASITGVISLGSLLPSSTNLKRGSASNNSILSQLYAVNRSSEKLPRHLISHSKSIVKVSRRGKHCPAISAVLAESNQEMASDEVDTETLGILGVDPAIEPYEDHFRSRVKRYVDQKELIEKYEGGLEEFAQGYLKLGFNREEDSIVYREWAPAAQEAQLIGDFNGWNGANHSMEKNQFGVWSIRIQDTGGKPAIPHNSRVKFRFKYGDGVWVDRLPAWIKYATVDPTRFAAPYDGVYWDPSPEERYQFQHPRPPKPKAPRIYEAHVGMSGSEPRVNTYREFADYVLPRIKANNYNTVQLMAVMEHSYYASFGYHVTNFFAVSSRSGSPEDLKYLIDKAHSLGLRVLMDVVHSHASNNITDGLNGFDVGQSSQDSYFHTGEHGYHKLWDSRLFNYANWEVLRFLLSNLRWWLEEYRFDGFRFDGVTSMLYHHHGINMAFTGNYDEYFSEATDVDAVVYLMLANRLVHNIFPEATVIAEDVSGMPGLCRPVSEGGVGFDYRLAMAIPDKWIDYLKNKKDEEWSMNEIMCSLTNRRYTEKCVAYAESHDQAIVGDKTVAFFLMDQEMYTGMSCLTEASPAIERGIALHKMIHCITMALGGEGYLNFMGNEFGHPEWIDFPREGNGWSYEKCRRQWDLVDTDHLRYKSMNAFDSAMNLLDEKFSFLSSTKQIVSSAHDEDKVIVFERGDLVFVFNFHPENTYEGYKIGCDLPGKYRVALDSDAWAFGGRGRVGHDVDHFTTPEGIPGVPETNFNNRPNSFKVLSPPRTCVAYYRVEDYPEESMGSTTVASILEEEVGEKDGGNLENPTPVEDKLGPSIEDISATEEVNDSETLDDIQNFNPFSSCNFELGIPLLSSMYFPLVRSYLFM*

Click here to download the sequence:
Link to NCBI Protein BLAST