Transcript Information: S_Transcript_410744.p1


Annotated TAIR IDAT5G60920.1
Annotated Gene NameCOBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Annotated Gene Symbol(s)COB
Annotation TypeOrtholog
Chromosome Positionchr5:24511466-24513932 | Reverse length=456
E-Value8.3E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63616736020352
Replicate 20.52739735994059
Replicate 30.29390814475858
Condition 2: 8 Hour
Replicate 10.42480857205444
Replicate 20.089130871074608
Replicate 30.3396947825495
Condition 3: 24 Hour
Replicate 10.17406281665812
Replicate 20.18058814005058
Replicate 30.30145869806912


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_410744.p1 GENE.S_Transcript_410744~~S_Transcript_410744.p1 ORF type:complete len:251 (+),score=25.90,COBRA|PF04833.11|1e-57 S_Transcript_410744:42-755(+)
ATGGGGATGATGTTGAGATCATCGGCTCCCAATATGACTACTTACTGCATTGCATTTTGTTTTTTCGTATTCCTTCACTCTTGCTCTAGCTTCCCTCCTACAGAAGCATATGATGGGGTTAATCCAAATCCAAATGGTAATATCACCATTAAGTGGGATGTCATGAACTGGACTCCAGATGGTTATGTTGCAGTAGTAACAATCTACAACTTCCAAAAGCATCGTAGCATACAAGCACCGGGATGGCGATTGAGTTGGACATGGGCACGAGAGGAGATGATATGGAGCACCGTAGGGGGACAAGTAGTGGAGCAAGGTGATTGCTCACATTTTAAAGGATATATTCCAACATCCTGTAAGAAAACCCCAACTATTGTGGACTTGCAGCCTGGAGTCCCTTACAATATGCAAATAGCGGATTGTTGCAAGGGAGGAGTGCTCAAGTCATGGTCTGGATCAGATCACGGCGATCAAGCCAATTCGATAAGCTCGCTTCAGATCAGTGTTGGGCAAGCAGGTAACAATGCCGGGACTGTAAGGCTTCCTAGGAACTTCACTTTTAAGGCACCAGCTGCAATGTACGCTTGTCGACCTGCAAAGTTGGTCAGGAGAACTATCTTCATTACCCCTGATAAGAGGAGAACTACTAGCGCTTTCAAGACTTGGAAGGTTACATGCTTCTATTCAGGTCTCAGAAAATCCCCAGGCGCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_410744.p1 GENE.S_Transcript_410744~~S_Transcript_410744.p1 ORF type:complete len:251 (+),score=25.90,COBRA|PF04833.11|1e-57 S_Transcript_410744:42-755(+)
MGMMLRSSAPNMTTYCIAFCFFVFLHSCSSFPPTEAYDGVNPNPNGNITIKWDVMNWTPDGYVAVVTIYNFQKHRSIQAPGWRLSWTWAREEMIWSTVGGQVVEQGDCSHFKGYIPTSCKKTPTIVDLQPGVPYNMQIADCCKGGVLKSWSGSDHGDQANSISSLQISVGQAGNNAGTVRLPRNFTFKAPAAMYACRPAKLVRRTIFITPDKRRTTSAFKTWKVTCFYSGLRKSPGA*

Click here to download the sequence:
Link to NCBI Protein BLAST