Transcript Information: S_Transcript_410882.p1


Annotated TAIR IDAT5G40250.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16086056-16087186 | Forward length=376
E-Value1.8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5578342186447
Replicate 21.8295971828183
Replicate 31.0795747951376
Condition 2: 8 Hour
Replicate 10.83221035383934
Replicate 22.5100122864084
Replicate 30.83183795531634
Condition 3: 24 Hour
Replicate 10.74592285089834
Replicate 21.1055517842121
Replicate 30.98427490361429


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_410882.p1 GENE.S_Transcript_410882~~S_Transcript_410882.p1 ORF type:5prime_partial len:205 (-),score=52.32 S_Transcript_410882:167-781(-)
TCAAATCCTCAAAATCGAAAACCGGGTTTTCGACAACAAGCCCTGGGGTGTAAAGGGCACCCCTACAAAGAGGGCAAGTTGAATTTGAGAGATCATGAGGATGGTATTGGGATTGGTCAAAAGCCAGTTGAGATTCAGATTGGTTCTGAAAAGAGGGTGTTTCCTGTGATACTTGGTAAGTTTAGGAGCACTAGCAATGAATCACAAGAAACAAGTGGGGATCATAAGGAAAAAGATATTGGTGAAACTAGTAGTAGTAGTTTGGATGCAAGAAGGTGTTTCTCAATGGGTTCATATCAATATGTTGTTGCTGATTCAACTTTGCAAGTTGCTTTGTGTCCTAAAAGACCTTCCAATGGAGGTAATGGTGGTGGTGAATTGAAGATTTTGAGAGGAGGGATAGAAGGGCAAAATGGGAATTCTACTACTGCTACTAATATTGGGGATGCTGAGGCTAGAAAGATTAATGTTGGGACTAAAAATGAGAGCCTATCTTTTTCTAAGATATGGTTATGGTCTAAAAAGGGCAGATTTCCAAATTCTTCAAATACAGATTTTAGTGGTATTCCTGTTGATATGAGTTTGCCTTGGACTAATAGAACTCAAGCTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_410882.p1 GENE.S_Transcript_410882~~S_Transcript_410882.p1 ORF type:5prime_partial len:205 (-),score=52.32 S_Transcript_410882:167-781(-)
SNPQNRKPGFRQQALGCKGHPYKEGKLNLRDHEDGIGIGQKPVEIQIGSEKRVFPVILGKFRSTSNESQETSGDHKEKDIGETSSSSLDARRCFSMGSYQYVVADSTLQVALCPKRPSNGGNGGGELKILRGGIEGQNGNSTTATNIGDAEARKINVGTKNESLSFSKIWLWSKKGRFPNSSNTDFSGIPVDMSLPWTNRTQAT*

Click here to download the sequence:
Link to NCBI Protein BLAST