Transcript Information: S_Transcript_411244.p1


Annotated TAIR IDAT1G26390.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9130164-9131756 | Reverse length=530
E-Value2.3E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59140002744845
Replicate 20.081714035398203
Replicate 30.23907250478742
Condition 2: 8 Hour
Replicate 10.19745731775123
Replicate 20
Replicate 31.1052661721101
Condition 3: 24 Hour
Replicate 10.20226743972772
Replicate 20.04197002143768
Replicate 30.046707489639104


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_411244.p1 GENE.S_Transcript_411244~~S_Transcript_411244.p1 ORF type:5prime_partial len:540 (+),score=50.25,FAD_binding_4|PF01565.19|7.6e-22,BBE|PF08031.8|8.2e-17 S_Transcript_411244:1-1620(+)
ATACAAAACAAGAAAATGAAGTTCTTCAACCCTTATTTGCTAGCCATTTCCCTTGCATTATTTCAACTTATCGTCTTATCATTTGCTTCCCACGTTGGAGCAGCAAATTCACCCATTGACAACTTTCTCCAATGCCTTCCTTCCCGTTCAAATCCTTCAAATCCAATCTCTAATTCCACCTACACTCCTACAAACCCTTCATTCTTAAGTGTTCTTCGAGCCTACATACGTGATAGTAGATTCAACACGTCTTCAACTCCAAAACCTCTAGCCATAATCACAGCCTTAGATGTGTCCCATGTACAAGCCACCGTGGTATGTGCAAAATCAAGTGGGTTACAAATCAGGATACGAAGTGGGGGCCACGATTTCGAGGGCATGTCTTACGTGTCAAATGTCCCCTTTGTGATCCTAGATATGTTCAATCTTCGATCAATTAGTGTTGATATACCAAGTGAAAGTGCTTGGATTCAGGCTGGGGCTACTATTGGTGAACTTTATTATAGCATAGCTAAGAAAAGTAACATCCATGCTTTTCCTGCGGGTGTATGTTTCACTCTTGGTGCCGGTGGTCATTTTAGTGGGGGTGGGTATGGTAACATGCTAAGGCAATTCGGCTTGTCCATCGATAATATTATCGATGGACAACTCGTAGATGTTAATGGTAGGGTTCTTAATCGAACGACAATGGGTGAAGATCTATTTTGGGCTATTAGGGGTGGTGGAGCGGCTAGTTTTGGGGTGGTTTTAGAATGGAAAATCAAGTTAGTACGAGTACCAAAAGTTGTCACGGTTTTCAATGTCCCTAGGACCTTAGAACAAGGTGCAACCAACGTTGTACTCCAATGGCAACAAGTCGCGACTAAGATTGATCGTAAGCTCTTCATAAGAGTACAACCACAAGTACAATTCCTACATAACGGCAAAAAGACTGTACAAGTCTCATTCATAGGGATGTACCTAGGACGAGCTAGCTCCTTACTTTCATTAATGGAGACAAACTTTCCATTATTAGGGTTACAAGGGCAAGATTGTAAGGAGATGTCATGGGTAGAATCAAACCTATTTTGGAATGGCAACGACCCAAAAAGAACCCCTCTTGAGGTGTTACTAAAAAGAACACCAACTTCATCCCATGCATATTCAAAACACAAATCTGATTATGTAAAAACACCAATCCCAAGGGCTGGCTTGGAGACAATATGGCAAAAAATGATTGAGTTAGAAAGTGTGCTCATGCAATGGAACCCATATGGAGGGAGGATGAGTGAGATCCCTGAGAATGCAACCGCGTTCCCACATCGGTCAGGGAACTTATTCAAGATGCAATATATAACTATTTGGCAAGATGATGGAACTCAAGCTTTGGACAAGAACATCAAGGCAACTCGAGATCTTTATGCTACATTCACTCCATATGTGTCTAGGAATCCAAGAGAAGCGTTCTTAAATTATAGGGATATTGACATTGGGACCAATAGTAATGGGAGCTTGGGTTTTGCTATGGATTACTTCAAGGGGAATGTTAAGAGGCTTCTTCAAGTCAAGGCTGAGGTTGATCCCACCAATTTCTTCCGCTATGAACAAAGTATTCCGGTTCTTCCAGCTGTGCAACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_411244.p1 GENE.S_Transcript_411244~~S_Transcript_411244.p1 ORF type:5prime_partial len:540 (+),score=50.25,FAD_binding_4|PF01565.19|7.6e-22,BBE|PF08031.8|8.2e-17 S_Transcript_411244:1-1620(+)
IQNKKMKFFNPYLLAISLALFQLIVLSFASHVGAANSPIDNFLQCLPSRSNPSNPISNSTYTPTNPSFLSVLRAYIRDSRFNTSSTPKPLAIITALDVSHVQATVVCAKSSGLQIRIRSGGHDFEGMSYVSNVPFVILDMFNLRSISVDIPSESAWIQAGATIGELYYSIAKKSNIHAFPAGVCFTLGAGGHFSGGGYGNMLRQFGLSIDNIIDGQLVDVNGRVLNRTTMGEDLFWAIRGGGAASFGVVLEWKIKLVRVPKVVTVFNVPRTLEQGATNVVLQWQQVATKIDRKLFIRVQPQVQFLHNGKKTVQVSFIGMYLGRASSLLSLMETNFPLLGLQGQDCKEMSWVESNLFWNGNDPKRTPLEVLLKRTPTSSHAYSKHKSDYVKTPIPRAGLETIWQKMIELESVLMQWNPYGGRMSEIPENATAFPHRSGNLFKMQYITIWQDDGTQALDKNIKATRDLYATFTPYVSRNPREAFLNYRDIDIGTNSNGSLGFAMDYFKGNVKRLLQVKAEVDPTNFFRYEQSIPVLPAVQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST