Transcript Information: S_Transcript_411662.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.054312247418736
Replicate 20.13507830341336
Replicate 30.33874413214777
Condition 2: 8 Hour
Replicate 10
Replicate 20.22828416979313
Replicate 30.087003459612169
Condition 3: 24 Hour
Replicate 10.22290697439382
Replicate 20.092505353372847
Replicate 30.051473560010441


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_411662.p1 GENE.S_Transcript_411662~~S_Transcript_411662.p1 ORF type:3prime_partial len:490 (+),score=58.93,rve|PF00665.22|8.3e+03,rve|PF00665.22|1.4e-18,gag_pre-integrs|PF13976.2|2.5e-10 S_Transcript_411662:432-1898(+)
ATGTTGAATTGTAGCTTAATTTCAGTTTCACAGTTAAGTGATGATATGAATTGTTTTGTTCAATTCTCTACTAACATATGTGCTATACAGGACCTTCACTCGAGGAAGCTGATTGGAATGGGTGAGAGAAGGAATGGACTTTACTATCTTCGGAACATGTCAATGGTCAAGGCCGTTACAGTTGGTGCGCCGTCGCTGTTGGAGGTTTGGCATCGTCGACTGGGGCATCCCTCCGAGAAAGTATTGAAGTTACTTCCCTTTATTCGTAGTTATAAAGATCACACGAATAAAGCCTGTGAAATATGTCCTCGAGCTAAGCAACATAGGCATAGTTTTCCTATTAGTGAGCATAATGCTACTCGTATTTTTGAACTGATTCATTGTGACCTTTGGGGTCCTTATGACACTCCTAGTTCTTGTGGCTCACACTATTTTTTGACTGTGGTTGATGATTTTTCTCGTTGTGTATGGGTATATCTTTTACATAATAAAAAGGAAGTCTTCCCCATGTTCATGTCTTTCATTGCCATGGTTGATCGTCAATTCAATCAAAAGATAAAGACGGTTCGAAGTGATAATGGTACCGAGTTTAGTTGTTTGATGGATTATTTTATAGCCAATGGAATTATTTTCCAGACTTCTTGTGTTGGGACCCCACAGCAAAATGGGCGAGTAGAGAGAAAGCATCAACATATATTAAATGTGGCTCGTGCTCTTCGTTTTCAAGCTCATTTGCCTATTTCCTTTTGGGGGGAGTGTGTTTTAGCTGCTGCTTATGTTATTAATAGAACACCCTCTATCGTCCTTCACAATAAAACCCCGTATGAAGTCTTGTTTGGTAAACCACCATCGTTTTCTGAGCTTCGTGTATTTGGTTGTTTGTGTTTTGCTCACAATCAACGTGCTAAAGGGGACAAGTTTGCTAGCAGAAGTAGGAAATGTGTGTTTGTCGGGTATCCCTTTGGGAAAAAGGGTTGGTCTTTATATGATTTAGACTTCAAGCAATTCTTTGTTTCTCGAGATGTAAAATTGTTTGAGGATAAATTTCCTTTTATGGTTCCGGAGGTCGAGCCTTCTTTGGGTAACAGTGTTTCTAATGATGATGGGGTTGTTTTTGATACTAATTATGACCAAAGCGAGCCCGATTCTCCTTCCATGTTACAATCCTCTACTGATAATTTGGCTCCTCCAGTCACCAGCAGTTCGATATTGCCAGAAGCTACTAGTACTCATGCCCCTAATCTTGGTCGTGGGCATAGGGAGAAATTTCCTTCAGTCAAACCTCAAGATTATGTCACCCACACCATTGTTGCTAGTAGTCCATGTCCTATCTCACCTTCTTCCACCACTTCCTCAGGTACGCCTTTTCCCATAGCACATTATGTTACTTGTGACAAATTTACTGTGAAACATCGAAATTTTCTAGCTGCAATTACTGCAGGAATTGAGCCACAATCTTTTAAGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_411662.p1 GENE.S_Transcript_411662~~S_Transcript_411662.p1 ORF type:3prime_partial len:490 (+),score=58.93,rve|PF00665.22|8.3e+03,rve|PF00665.22|1.4e-18,gag_pre-integrs|PF13976.2|2.5e-10 S_Transcript_411662:432-1898(+)
MLNCSLISVSQLSDDMNCFVQFSTNICAIQDLHSRKLIGMGERRNGLYYLRNMSMVKAVTVGAPSLLEVWHRRLGHPSEKVLKLLPFIRSYKDHTNKACEICPRAKQHRHSFPISEHNATRIFELIHCDLWGPYDTPSSCGSHYFLTVVDDFSRCVWVYLLHNKKEVFPMFMSFIAMVDRQFNQKIKTVRSDNGTEFSCLMDYFIANGIIFQTSCVGTPQQNGRVERKHQHILNVARALRFQAHLPISFWGECVLAAAYVINRTPSIVLHNKTPYEVLFGKPPSFSELRVFGCLCFAHNQRAKGDKFASRSRKCVFVGYPFGKKGWSLYDLDFKQFFVSRDVKLFEDKFPFMVPEVEPSLGNSVSNDDGVVFDTNYDQSEPDSPSMLQSSTDNLAPPVTSSSILPEATSTHAPNLGRGHREKFPSVKPQDYVTHTIVASSPCPISPSSTTSSGTPFPIAHYVTCDKFTVKHRNFLAAITAGIEPQSFKE

Click here to download the sequence:
Link to NCBI Protein BLAST