Transcript Information: S_Transcript_41176.p1


Annotated TAIR IDAT2G26260.1
Annotated Gene Name3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
Annotated Gene Symbol(s)AT3BETAHSD/D2, 3BETAHSD/D2
Annotation TypeOrtholog
Chromosome Positionchr2:11178237-11182872 | Forward length=564
E-Value1.2E-289
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.887138681154
Replicate 240.355857877684
Replicate 343.486379506475
Condition 2: 8 Hour
Replicate 118.793959092437
Replicate 216.698412204113
Replicate 317.67375134154
Condition 3: 24 Hour
Replicate 155.201549108426
Replicate 252.420254833063
Replicate 367.183179431613


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41176.p1 GENE.S_Transcript_41176~~S_Transcript_41176.p1 ORF type:complete len:556 (+),score=110.82,3Beta_HSD|PF01073.15|2.1e-78,Reticulon|PF02453.13|3.4e-36,Epimerase|PF01370.17|2.8e-35,GDP_Man_Dehyd|PF16363.1|4.9e-19,NAD_binding_4|PF07993.8|3.2e-16,RmlD_sub_bind|PF04321.13|2.7e-10,Polysacc_synt_2|PF02719.11|3.3e-08,Polysacc_synt_2|PF02719.11|5.1e+03,NmrA|PF05368.9|4.8e-07 S_Transcript_41176:384-2051(+)
ATGGCAAGTCAAGAGAGATGGTGCGTTGTTACTGGGGGAAGAGGTTTCGCAGCCAGGCATTTGGTCGAAATGCTGATTCGATATGAGATGTTTTGTGTGAGAATAGCTGATTTGCAGCCTAATATTAAGCTTGAGCCTTATGAAGATGAAGGTACTCTTGGCAAAGCATTGCAATCTGGCCGCGCTCATTATGTATCTGCTGATCTCAGAGATAAGGCTGAAGTACTTAAAGCTTGTCAAGGAGCTGAGGTTGTCTTTCATATGGCAGCTCCAGATTCTTCCATCAATAATTACAACCTCCAGCGTTCTGTCAATGTTGAAGGAACCAAAAATGTCATTGAGGCTTGTGTTGAGGCGCAAGTAAAGAGGTTAATTTATACTAGCTCTCCTAGTGTGGTCTTTGATGGGGTTCATGGGATCATCGATGGGGATGAGTCACTGTCTTATCCTGTTAAGCATAATGATTTATATTCAGCCACGAAAGCTGAAGGAGAAGCATTGGTCTTGAAGGCAAATGGTGAAAATGGGCTCCTCACATGCTGCATACGTCCGAGCAGTATATTTGGCCCTGGTGATAGATTACTAGTTCCATCATTAGTTAATGCTGCAAGGGCTGGGAAGTCTAAGTTCATCATAGGAGATGGCAATAACATGTATGACTTCACCTACGTTGAGAATGTTGCTCACGCCCACATATGTGCTGAACGAGCTCTAGCATCTAAAGGAGCAGTTGCAGAGAAGGCTTCGGGCCAGGCATACTTCATTACAAATATGGAGCCAATCAAATTTTGGGAATTTATGTCCCTGATACTCGAGGGTCTAGGCTATGAGAGGCCAAGAATAAAGATTCCTGCAGTTCTGATGATGCCTATTGCTCATTTGATCGAGTTCATGTATAAGCTACTAGCTCCATATGGTATGAAAGTTCCACAGTTGACACCTTCAAGAATCAGACTCCTTTCTTGCAGCAGAACTTTTAATTGCTCAAAAGCGAAGGATCGACTTGGTTACACACCCATTGTGTCTCTTCAGGAGGGTATTGAGAGAACAATAGAGTCTTACTCACATTTGAGAGCAGAACAACAACCTAAAAGAGTTGGACAATCTAAAGCTCACAGATATCTTGGAGGTGGAAGAGTTGCTGATATACTTCTCTGGAGGGACAAAAAGCAAACCTTTGCTGCTGCACTGATTTTGCTTGCATTTTACTACAACTTCATTGCTTCAGGATACACTATGGTTGCAACAATTTCCAAACTCATCTTGATGGCGGCAGTTTTCCTTTACGTTCATGCCAATTTGCCTGAAAGAATATTTGGGTGTTCTGTTGAGAAAGTTCCCGTGACAGCGTTTCACTGCTCCGAAGAGAACTCAAGAAGAGCAACTCATTCAGCTGTCTCACTGTGGAATAGTGCGGTTGGTATTTTGAAGTCCCTTTGTCAGGGCAATGACTGGGCGTTGTTTCTTAAGGTTGTTGTCACTCTATTGATTCTCAGTTTCATTGGAGCCTTGTCTATTCGGCGTTTATTTTTGGCTGGGATCCTGACCTCATTTGTTGCATTCTATATCTACGAAAAGAAAGAAGAAGAAATTGATCACCTTCTTTCAAAAACTACTAGCATTCCGGGCCAATTGAAATCCAACATAATGAAGAAAAAGAATCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41176.p1 GENE.S_Transcript_41176~~S_Transcript_41176.p1 ORF type:complete len:556 (+),score=110.82,3Beta_HSD|PF01073.15|2.1e-78,Reticulon|PF02453.13|3.4e-36,Epimerase|PF01370.17|2.8e-35,GDP_Man_Dehyd|PF16363.1|4.9e-19,NAD_binding_4|PF07993.8|3.2e-16,RmlD_sub_bind|PF04321.13|2.7e-10,Polysacc_synt_2|PF02719.11|3.3e-08,Polysacc_synt_2|PF02719.11|5.1e+03,NmrA|PF05368.9|4.8e-07 S_Transcript_41176:384-2051(+)
MASQERWCVVTGGRGFAARHLVEMLIRYEMFCVRIADLQPNIKLEPYEDEGTLGKALQSGRAHYVSADLRDKAEVLKACQGAEVVFHMAAPDSSINNYNLQRSVNVEGTKNVIEACVEAQVKRLIYTSSPSVVFDGVHGIIDGDESLSYPVKHNDLYSATKAEGEALVLKANGENGLLTCCIRPSSIFGPGDRLLVPSLVNAARAGKSKFIIGDGNNMYDFTYVENVAHAHICAERALASKGAVAEKASGQAYFITNMEPIKFWEFMSLILEGLGYERPRIKIPAVLMMPIAHLIEFMYKLLAPYGMKVPQLTPSRIRLLSCSRTFNCSKAKDRLGYTPIVSLQEGIERTIESYSHLRAEQQPKRVGQSKAHRYLGGGRVADILLWRDKKQTFAAALILLAFYYNFIASGYTMVATISKLILMAAVFLYVHANLPERIFGCSVEKVPVTAFHCSEENSRRATHSAVSLWNSAVGILKSLCQGNDWALFLKVVVTLLILSFIGALSIRRLFLAGILTSFVAFYIYEKKEEEIDHLLSKTTSIPGQLKSNIMKKKNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST