Transcript Information: S_Transcript_411934.p5


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7603714638623
Replicate 20.15759135398225
Replicate 30.13173382916858
Condition 2: 8 Hour
Replicate 10.76162108275475
Replicate 20.31959783771038
Replicate 30.30451210864259
Condition 3: 24 Hour
Replicate 10.93620929245404
Replicate 20.32376873680496
Replicate 30.18015746003654


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_411934.p5 GENE.S_Transcript_411934~~S_Transcript_411934.p5 ORF type:complete len:140 (+),score=20.64,zf-RVT|PF13966.2|5.5e-07,zf-RVT|PF13966.2|5e+03 S_Transcript_411934:3476-3895(+)
ATGCTGAAGAAGTTAAGAACTAAAGATAAAATCAGTAAATGGAATACAGCATGTGATCAAACTTGTCTGCTATGCAAAACAGGGAATGAAACTACAGAGCATTTGATGACTGACTGTCCTTACAGCCACAATGTGATCAGCAAACTTATGCAAGGAATTAAGATTTCTTGGCAAGTGGTCAGCAGCTGGCAGCAAATGCTGGATAGATGGTATAAAGTAGGAAAGGGGAAGAAACCTGCAGCAAGGTGCGCTAGAGCCATACTAGCAGAGGCTTGTTATGCCATTTGGAGGGAGCGTAACCAAAGACTTTTCACACAGCAAGAGAAACCAGAAGATCAGATTTTTAAAGAAGTCATGCTCTTTGTTAGTGTGAGAGGTCTTACTCGGGATGATGTAAGCAATTTTCTAAATTCGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_411934.p5 GENE.S_Transcript_411934~~S_Transcript_411934.p5 ORF type:complete len:140 (+),score=20.64,zf-RVT|PF13966.2|5.5e-07,zf-RVT|PF13966.2|5e+03 S_Transcript_411934:3476-3895(+)
MLKKLRTKDKISKWNTACDQTCLLCKTGNETTEHLMTDCPYSHNVISKLMQGIKISWQVVSSWQQMLDRWYKVGKGKKPAARCARAILAEACYAIWRERNQRLFTQQEKPEDQIFKEVMLFVSVRGLTRDDVSNFLNSL*

Click here to download the sequence:
Link to NCBI Protein BLAST