Transcript Information: S_Transcript_411938.p2


Annotated TAIR IDAT3G31430.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:12795861-12796871 | Reverse length=336
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47523216491394
Replicate 20.26265225663708
Replicate 30.54889095486906
Condition 2: 8 Hour
Replicate 10.38081054137738
Replicate 20.53266306285063
Replicate 30.38064013580324
Condition 3: 24 Hour
Replicate 10.13002906839639
Replicate 20.2698072806708
Replicate 30.7506560834856


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_411938.p2 GENE.S_Transcript_411938~~S_Transcript_411938.p2 ORF type:complete len:168 (+),score=22.56,DUF4283|PF14111.2|7.9e-22,zf-CCHC_4|PF14392.2|8.9e-06 S_Transcript_411938:521-1024(+)
ATGGCTACTGGACCTTATTCCATTAATGACAGACCGATTATATTGAAATTATGGACCCCTAATATGGATTTGAACGCTGCATTGCTGACTGATATACCTATTTGGGTGAATTTGCCTAATCTACCATTGGCTTATTGGGGCTCGAATTCGATTGGAAGGATTTCCAGCTGTATAGGCAAACCCTTGTTTGCAGATGAAAGCACTACTCAGCAGTCCAGGATCTCCTTTGCTAGGGTTCTGGTGGAAGTGAATGTCACCCAAACACTCCCAGCTTCCATCCAAATTAAGGATCCGTTTGGGGTAACAGTGACACAAGCTGTTGAGTATGAGTGGGTGCGAGATTTTTGCCAGAAATGCCTGAAACTGGGCCATGACTATAATAAATCAGAACAAGCTCCTCCTCCAGCAGGCCATAAGAGACGAAGAAGGCAGTGGAGAAGGAAAGAAAAGACCACAACTCAACAGAGATCCCAGATGATTCAGGTAATACTGATCCTATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_411938.p2 GENE.S_Transcript_411938~~S_Transcript_411938.p2 ORF type:complete len:168 (+),score=22.56,DUF4283|PF14111.2|7.9e-22,zf-CCHC_4|PF14392.2|8.9e-06 S_Transcript_411938:521-1024(+)
MATGPYSINDRPIILKLWTPNMDLNAALLTDIPIWVNLPNLPLAYWGSNSIGRISSCIGKPLFADESTTQQSRISFARVLVEVNVTQTLPASIQIKDPFGVTVTQAVEYEWVRDFCQKCLKLGHDYNKSEQAPPPAGHKRRRRQWRRKEKTTTQQRSQMIQVILILL*

Click here to download the sequence:
Link to NCBI Protein BLAST