Transcript Information: S_Transcript_412227.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6137769070266
Replicate 22.6593540984505
Replicate 31.8113401510679
Condition 2: 8 Hour
Replicate 10.95202635344344
Replicate 21.0986175671294
Replicate 31.4274005092621
Condition 3: 24 Hour
Replicate 13.315741244108
Replicate 22.7317987167919
Replicate 32.2519682504568


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_412227.p1 GENE.S_Transcript_412227~~S_Transcript_412227.p1 ORF type:5prime_partial len:224 (+),score=32.51,RVT_1|PF00078.23|2.5e-10,RVT_1|PF00078.23|2.1e+03 S_Transcript_412227:1-672(+)
CGCGCAATAAAATTTCAAAGCACACAAAAAGACAGAAAGAAAAAGAGAGAGAGAGAGAGAGAATTTACCATGTCTCCTTATATGTTTGTCATGTGTATGGAGATATTTTCCAGAATGTTGAGGCAAGTGGGAACTGATAGGGAGTTTTCATTTCATCCTAAAACAGTAAGGCTTAAACTGAATCATATCATTTTTGCTGATGACCTCCTTATATTCACAAGGGGAGATGTGCCTTCTGTTAATTGTGTTCTTAAATGCCTGCACTATTTCTCTCATATGTCTGGGTTGTTTGTTTATCCACTAAAATCTGAAATATACATGGGTGGAATCACATCTGGAGTTCAGAAACAGATTTTGCAGATTTCTCAATTCAGCAAAGGAACCTTGCCTGTCAGATATTTGGGGCTGCCACTTAATGCAGCAGGTATTAAACATGATATGTGCAAGAGTTTGTTAGAGAAAATCAGGAAGAAACTTAATCATTGGGGATTGCATGTATTATCTTATGCTGGGAGGCTTGAGCTTTTAAATTCAATACTATTTGGAATTGAGAACTTCTGGTGTACATGGTTTTTGTTGCCTAAGAAAACAATCTTGGCCATTGAGAAACTTTGCAGAAAATCCCTTTGGGGGGTCAAAGAAAATGAGAGGAAATTTATGTTTATATCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_412227.p1 GENE.S_Transcript_412227~~S_Transcript_412227.p1 ORF type:5prime_partial len:224 (+),score=32.51,RVT_1|PF00078.23|2.5e-10,RVT_1|PF00078.23|2.1e+03 S_Transcript_412227:1-672(+)
RAIKFQSTQKDRKKKREREREFTMSPYMFVMCMEIFSRMLRQVGTDREFSFHPKTVRLKLNHIIFADDLLIFTRGDVPSVNCVLKCLHYFSHMSGLFVYPLKSEIYMGGITSGVQKQILQISQFSKGTLPVRYLGLPLNAAGIKHDMCKSLLEKIRKKLNHWGLHVLSYAGRLELLNSILFGIENFWCTWFLLPKKTILAIEKLCRKSLWGVKENERKFMFIS*

Click here to download the sequence:
Link to NCBI Protein BLAST