Transcript Information: S_Transcript_41226.p1


Annotated TAIR IDAT4G09040.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:5795075-5797315 | Reverse length=304
E-Value2E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.246127007168
Replicate 252.689425061696
Replicate 360.666895011844
Condition 2: 8 Hour
Replicate 168.185129566623
Replicate 273.665198974889
Replicate 364.29813241371
Condition 3: 24 Hour
Replicate 155.402648589632
Replicate 251.739096164425
Replicate 358.408944938164


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41226.p1 GENE.S_Transcript_41226~~S_Transcript_41226.p1 ORF type:complete len:304 (+),score=62.63,RRM_1|PF00076.18|2.1e-13,RRM_1|PF00076.18|1.1e-14,RRM_6|PF14259.2|2.4e-14,RRM_6|PF14259.2|8.3e-11,RRM_5|PF13893.2|1e-08,RRM_5|PF13893.2|5.5e-06,RRM_occluded|PF16842.1|4e-05,RRM_occluded|PF16842.1|4.8e+02 S_Transcript_41226:91-1002(+)
ATGCCAGAGCTGAAATCTCTCTCTCAAAAAATGGCAACTCAACTAGGTTCACTATGCTTCCCACCTACTTCTACAGCCTCATTCTCTTTTCTTGACCAAAACCCTAATTTATTTTCATTATCCCCTCTTCCTACCCTTTATCTCTCCTCCCGTAATATTATTGTACTCAAACCCATCTCCCTCTCTCTTCGCCGAAACTCTCGACTTGACCCCATTTTCTGCTCAACTACCCTCGCCCCTGAAAACCCTTCATTAAAATCCAAACAAGACGAGAATTCCACCACTAGATTGCTTGCCCAGAACGTCCCTTGGACTTCCACTCCTGATGATATTCGAGCTTTGTTTGAGAAACATGGCACTGTCGTCGATGTTGAGCTTTCAATGCATAAGAAGAATAGGAACAGGGGATTGGCGTTTGTTGAAATGGGTTCTGCTGAGGAGGCTGCTGAAGCTTTTGCCAAGCTTGAGGCGTATGAATTTGAGGGCCGGAAGTTAAAGCTGACCTATGCTAAGCGAAAGAAGAAGCAACCCTCTCCTCCTGTACAATCTAAGCCAGCTGTTCTTTACAACCTATTTGTGGCGAATTTGTCGTTTGAGGCACGGGGTAAAGATTTGAAAGAGTTCTTTCAGTCAGGTGGTAGTAATGTGGTCTCCGCTGAGGTCATATTTCACGATTTTCCGAGAAGATCCTCTGGATATGGATTTGTTTCTTTTAAAACAAAGAAAGAAGCAGATGAAGCCCTTTCAACTTACCAAGGAAAGGAGCTGATGGGGAGACCAATCAGAGTTGCACGCAGTAAGAGGTTCGTAAAACTTGAGTCAGAAATGAGTTCTCAGTCAGAACATGATGAAGACACGGAAGCTAATTCAGGTCTTGATTCCGACCAACCTGAGACTGTTGAAAACCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41226.p1 GENE.S_Transcript_41226~~S_Transcript_41226.p1 ORF type:complete len:304 (+),score=62.63,RRM_1|PF00076.18|2.1e-13,RRM_1|PF00076.18|1.1e-14,RRM_6|PF14259.2|2.4e-14,RRM_6|PF14259.2|8.3e-11,RRM_5|PF13893.2|1e-08,RRM_5|PF13893.2|5.5e-06,RRM_occluded|PF16842.1|4e-05,RRM_occluded|PF16842.1|4.8e+02 S_Transcript_41226:91-1002(+)
MPELKSLSQKMATQLGSLCFPPTSTASFSFLDQNPNLFSLSPLPTLYLSSRNIIVLKPISLSLRRNSRLDPIFCSTTLAPENPSLKSKQDENSTTRLLAQNVPWTSTPDDIRALFEKHGTVVDVELSMHKKNRNRGLAFVEMGSAEEAAEAFAKLEAYEFEGRKLKLTYAKRKKKQPSPPVQSKPAVLYNLFVANLSFEARGKDLKEFFQSGGSNVVSAEVIFHDFPRRSSGYGFVSFKTKKEADEALSTYQGKELMGRPIRVARSKRFVKLESEMSSQSEHDEDTEANSGLDSDQPETVENL*

Click here to download the sequence:
Link to NCBI Protein BLAST