Transcript Information: S_Transcript_412464.p1


Annotated TAIR IDAT5G18450.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6116097-6117020 | Reverse length=307
E-Value2.1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63871202964433
Replicate 20.17650231646012
Replicate 30
Condition 2: 8 Hour
Replicate 10.085301561268532
Replicate 20
Replicate 30.3410535616797
Condition 3: 24 Hour
Replicate 10.087379533962377
Replicate 20
Replicate 30.10088817762046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_412464.p1 GENE.S_Transcript_412464~~S_Transcript_412464.p1 ORF type:5prime_partial len:250 (+),score=51.90,AP2|PF00847.16|4.4e-13 S_Transcript_412464:2-751(+)
GGGCCCCAGAATGCGACCTGTACTTACCGCGGTGTGAGACAAAGAACCTGGGGCAAATGGGTGGCGGAAATCAGAGAACCAAAGAAGAGAACTCGTCTTTGGTTAGGCTCGTTTGCCACTGCTGAAGAAGCTGCCATGGCTTATGATGAAGCTGCTAGACGGCTTTATGGACCGGATGCTTATCTCAACTTACCCCATTTAAGATGCAATTTCAACCCACTTAACAAATCGCAGAAGTTTCGTTGGTTCCCTTCCAGGAATTTCATCTCCATGTTCCCTTCGAGTGAGCTGCTAAACGTAAATGTGCAACCAAATGTACATATCATTCATCAGAGACTGCAAGAGCTTGAGAAAAACAGGATTATCAAACAATCGCAACGTTCTTTCAGTTCACCTTCCAATGATAGCAAATCCAAGCTCAAGAGTATTAAAGATGATAGTGATGTTAGCAAAGTATCAGAAAGGAAAGTGTCAGAGGAAAACGATAAGCCTCAGATTGACTTGCATGAGTTTCTGCAACAGATGGGTGTACTGAAGAAGCACAGTGAGTCCACTTACAGTGAAGTTACTACTGAGAAAACGAATCTTGGACCAGCTGAAGAAGTCGACGATGATATCTTAGCTGAGACGAGTTCTGAATGGGATGGACTTGAGATGCTTAGAGTGGAGGGGCATCAACAGGCTGGATTGAGCAGCTGCCAAGAATATAACTTCGAAGATTTAGAAGCTTTTGAGGGGCTTTTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_412464.p1 GENE.S_Transcript_412464~~S_Transcript_412464.p1 ORF type:5prime_partial len:250 (+),score=51.90,AP2|PF00847.16|4.4e-13 S_Transcript_412464:2-751(+)
GPQNATCTYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHLRCNFNPLNKSQKFRWFPSRNFISMFPSSELLNVNVQPNVHIIHQRLQELEKNRIIKQSQRSFSSPSNDSKSKLKSIKDDSDVSKVSERKVSEENDKPQIDLHEFLQQMGVLKKHSESTYSEVTTEKTNLGPAEEVDDDILAETSSEWDGLEMLRVEGHQQAGLSSCQEYNFEDLEAFEGLFA*

Click here to download the sequence:
Link to NCBI Protein BLAST