Transcript Information: S_Transcript_412522.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.14409047511576
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.29520112825127
Replicate 20.30626772400469
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_412522.p1 GENE.S_Transcript_412522~~S_Transcript_412522.p1 ORF type:internal len:148 (+),score=21.54,gag_pre-integrs|PF13976.2|4e+03,gag_pre-integrs|PF13976.2|1.1e-08 S_Transcript_412522:3-443(+)
ACAATTCAGATTAAAATGCATCATGGATGTATTAGGACTTTGTCTAATGTTCGTCATATTCCTGATTTAAAACGTATCCTATTTTCTTTAGGTACCCTTGAGTCTCTTGGGTGTAAGTATTCAACTGAAGATGGAATTTTAAAGGTTTCAAAAGGTGCCCTTGTCCTGTTAAAGGGAAAAAGAGTTGGTTGTCTCTACATCTTGCAGGGTTCTACATCGACAGGTTCTGAAGGTTCCAATACAGTAGCATTATCAACTACTTCTTCTGATGATGAGCTCGCTCGTTTATGGCACATGCGTTTAGGCCATATGAGTGAGAAAGGCATGAACCTAAGCAAGCATGGTCTCCTTGGTAGCAAAGGGAATGAAAAGCCCAAGACTCGTGAAGCCAATACTGTCATAGCCATACCAACTGTTGGTTTGGTCGTCATCATAATTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_412522.p1 GENE.S_Transcript_412522~~S_Transcript_412522.p1 ORF type:internal len:148 (+),score=21.54,gag_pre-integrs|PF13976.2|4e+03,gag_pre-integrs|PF13976.2|1.1e-08 S_Transcript_412522:3-443(+)
TIQIKMHHGCIRTLSNVRHIPDLKRILFSLGTLESLGCKYSTEDGILKVSKGALVLLKGKRVGCLYILQGSTSTGSEGSNTVALSTTSSDDELARLWHMRLGHMSEKGMNLSKHGLLGSKGNEKPKTREANTVIAIPTVGLVVIIIV

Click here to download the sequence:
Link to NCBI Protein BLAST