Transcript Information: S_Transcript_412781.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.27869662326095


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_412781.p1 GENE.S_Transcript_412781~~S_Transcript_412781.p1 ORF type:complete len:181 (-),score=14.18 S_Transcript_412781:387-929(-)
ATGAAACAAATTTTCCTTATCAATCTTTCATTCATTCATCTACCGCTTCCTTTGCTCAATCTCCCCCTGTTGACTTTACGATTCAACTGCTTCATGACGCAGCATCAGTTTCTATGCCCCATACCAGTCCTATTGAGTCTTCTCAGCTCACTGAGGTATCCCGTTCAAATGGCATGGCAGCAGCTTCTACTCTCAGTCCCAGAGGCTCCCACTTCACACCAATCATCAGTCCTGCACCTTCTACGGCCTGCGGACACATCCATCCATCCTATGGTGACTAGAACACGCACTAATAACCTCAAGCCTAAAAATCTCACAGCCACTAAGCATCCGTTACCAGATTCTAGCCTTACTTTCATTGAGCCTACTTCTTACAAACAAGCAGCTCGTCATTCTGAATGGCTAGATGCTATGAATAAAGAATACCAAGCTCTAACCCCTAATAAAACACAGAACCTTGTCCCTCCTCCTCCAAGTGCTAACATTGTTAGTTGTAAGTGGTTTTACAAGATGAAATGGCATCCTGATGGCACTATTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_412781.p1 GENE.S_Transcript_412781~~S_Transcript_412781.p1 ORF type:complete len:181 (-),score=14.18 S_Transcript_412781:387-929(-)
MKQIFLINLSFIHLPLPLLNLPLLTLRFNCFMTQHQFLCPIPVLLSLLSSLRYPVQMAWQQLLLSVPEAPTSHQSSVLHLLRPADTSIHPMVTRTRTNNLKPKNLTATKHPLPDSSLTFIEPTSYKQAARHSEWLDAMNKEYQALTPNKTQNLVPPPPSANIVSCKWFYKMKWHPDGTIE*

Click here to download the sequence:
Link to NCBI Protein BLAST