Transcript Information: S_Transcript_41281.p1


Annotated TAIR IDAT2G27940.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11897963-11898742 | Forward length=237
E-Value1.2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7879819276352
Replicate 25.3949156947208
Replicate 34.9135756719082
Condition 2: 8 Hour
Replicate 12.4905565333878
Replicate 23.4292614703231
Replicate 32.6450321845597
Condition 3: 24 Hour
Replicate 13.348485790529
Replicate 24.8801638065857
Replicate 34.6025628476489


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41281.p1 GENE.S_Transcript_41281~~S_Transcript_41281.p1 ORF type:complete len:274 (+),score=16.18,zf-RING_2|PF13639.2|1.9e-14,zf-RING_11|PF17123.1|8.5e-10,zf-rbx1|PF12678.3|4.8e-08,zf-C3HC4|PF00097.21|2e-08,zf-C3HC4_2|PF13923.2|9.1e-07 S_Transcript_41281:312-1133(+)
ATGAATATCTTCAACAACAAATATTCAATGACACCCCACTTGAGAAAACTCCTCCCACCAGATGATCACCCCCTCACACCCCAAATTTCCTCTCCAATATCATCATCAAAGTTCGCAGAAGCCGAAGCTCAAAATCTCAACACAAACTACAGCTCAACTTGCTGTTACAACAGCTTAAAACTAACCCCACCTTTTGACTCAGCAATGGCGTTAACCGTTCTAGTACTTTTAACGGCTCTCTTCTTTATGGGCTTCTTTTCCATCTACATTCGCCGTTTCGCCGACGAATCCTCCGTCGACCCCACGCGCCGCCGTCGCGCGTCGACAGGAACGTCGGAGTCTTCGTATTCGGGGAGGTCTAAGGGGAAGGGAGTGGATCCCACAACGATAGAGTCCTTGCCGGTGCACGTTTACGACCGTGGGGATGCGAAGCAGGGGATCGATAAGGTGGAATGTGCAATTTGTTTGAGCGAGTTCGAGGAGAGAGAGTGGGTGAAGGAGATTCCGTACTGTGGTCACGTGTTCCACGTGGAGTGTATCGACACGTGGCTCTCTAGTCACGTGACGTGTCCTCTTTGTCGGACGGAGAAGCTCTTCCGTCACGTGGCGGGTGAGCAGAAGGTGGAGGTGGAGGTGGAGAAGGGATTCGGTGTGAGTGAGGTACAGGATAGTGGTGTGAGGGAGGTGAGATTAACGGTGGATTTGGGTGAAACGTGGAATGGTGGAGAGAGTAGAGAGGTGGGGCCATTGGGTGTGAGGAGGAGTACGAGTTCTTCGTGGTTTGGTGAGAGAGTTACTTTGCATCGATCATTGAGTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41281.p1 GENE.S_Transcript_41281~~S_Transcript_41281.p1 ORF type:complete len:274 (+),score=16.18,zf-RING_2|PF13639.2|1.9e-14,zf-RING_11|PF17123.1|8.5e-10,zf-rbx1|PF12678.3|4.8e-08,zf-C3HC4|PF00097.21|2e-08,zf-C3HC4_2|PF13923.2|9.1e-07 S_Transcript_41281:312-1133(+)
MNIFNNKYSMTPHLRKLLPPDDHPLTPQISSPISSSKFAEAEAQNLNTNYSSTCCYNSLKLTPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADESSVDPTRRRRASTGTSESSYSGRSKGKGVDPTTIESLPVHVYDRGDAKQGIDKVECAICLSEFEEREWVKEIPYCGHVFHVECIDTWLSSHVTCPLCRTEKLFRHVAGEQKVEVEVEKGFGVSEVQDSGVREVRLTVDLGETWNGGESREVGPLGVRRSTSSSWFGERVTLHRSLSF*

Click here to download the sequence:
Link to NCBI Protein BLAST