Transcript Information: S_Transcript_41289.p1


Annotated TAIR IDAT5G48335.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19588083-19589366 | Forward length=114
E-Value1.9E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4969220811118
Replicate 27.8415938788758
Replicate 38.3325614835545
Condition 2: 8 Hour
Replicate 113.48895170662
Replicate 212.39885587262
Replicate 310.657923802491
Condition 3: 24 Hour
Replicate 110.132867643227
Replicate 29.4204999925781
Replicate 311.395501990263


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41289.p1 GENE.S_Transcript_41289~~S_Transcript_41289.p1 ORF type:complete len:166 (+),score=22.34 S_Transcript_41289:288-785(+)
ATGCTTGAAAACCCACCGGACCCTCCCTTACCCAACTCTTTGCCCGCTCCCATCAAGCGATATGCTCCACCCAATCAGCGGAATCGTAGCCTCAACAGGCGCAAATCTGGAGATCGATCAGAAGGAACAAGCAGTCTTCACTCAAATGATGGTGATAAGAATTCGGTTTCTGGTTTTCGAAGTGCTGCTACAGAACATTGTTATGCAGGGAGCAGCATACCTGTAAATGAAAGATCTCTACCACAATTAATAAGCCTAGCAGGGTGTTCTAGAAGTGAAGCCTCGCAACTTCTGCATGAACGTTGGAATGCAGCTATACATAGCTACAATGATCCTTTAGTAGATTTATCTGAAAGACCAGTCATGTACACTAGCAGTCCTGCATCAGCATGGGGAACCTTTAGACTCCCTCATCAGCTAATGTCTGGTCCGCAGAAGGATTTCTTGGCTGAACTTCAGGATGCTATTCATAAATCGAATACCGACTCAACAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41289.p1 GENE.S_Transcript_41289~~S_Transcript_41289.p1 ORF type:complete len:166 (+),score=22.34 S_Transcript_41289:288-785(+)
MLENPPDPPLPNSLPAPIKRYAPPNQRNRSLNRRKSGDRSEGTSSLHSNDGDKNSVSGFRSAATEHCYAGSSIPVNERSLPQLISLAGCSRSEASQLLHERWNAAIHSYNDPLVDLSERPVMYTSSPASAWGTFRLPHQLMSGPQKDFLAELQDAIHKSNTDSTN*

Click here to download the sequence:
Link to NCBI Protein BLAST