Transcript Information: S_Transcript_412974.p1


Annotated TAIR IDAT2G12880.1
Annotated Gene NameZinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5291523-5291882 | Forward length=119
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.025126343438148
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.087121992935891
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_412974.p1 GENE.S_Transcript_412974~~S_Transcript_412974.p1 ORF type:complete len:734 (-),score=104.62,RVP_2|PF08284.7|3.3e-31,Retrotrans_gag|PF03732.13|2e-11,RVT_1|PF00078.23|2.8e-06 S_Transcript_412974:618-2819(-)
ATGAGTCGAAGAAACAACAATGTGTTTGACACCCCAGAGATGATTGTTGCGAGACTTAGAGCAACTGAAGAACTAAACCAAAACATGGCTGCCATGCTGCAAAGACTCGCGGAAAGACAAGAAGTAGAGGATCCAGCTGCTTCAATGCTGAAGAAGATCGCCAGCCATCACCCTCCTACTTATGATGGCAAGGAAGACCCGGCCATGCTGGAACATTGGATCAGGGAGATGGACAAGTTGTTCTTGGCCATCGGGTGCCCAGCGAACCTGCGAGTTAACAGTGCAACCTTCTACCTGCAGAATGAGGCCGATCGATGGTGGGTCTCTGAGGGTCCAGGCTTGCTGGAAAGCCCTGATTTCGGATGGGAGGCTCTGAAGACTGCTTTGCGAGATCGTTTCTACCCCGAGCATTTGAAGAGGCAGAAGTACAACGAATTTGTAAACTTGAGACAAGGCAGGATGACAGAGTATGCCAACAAGTTTACCGATCTCGCTAGATTTGCTCCGAACCTGGTGCCTAATGAGAAAGCAAAGGCACAAAAGTTTGAGGATGGGCTGAATTTCCACATCCAAGAGCTCATGGGGGGTATCTGCTCAAACACCTTCCAGGAGGCGTATGGGCGAGCCGCCAATCTCGCTCGCATCTTACAGAGAAAGGAGGAAGTGCTTGGGAAGAACAGGAAAAGAGATAATGGCCCGAGTTCACACCAAGGTTCGCATGCCAATGACAAGAGGCCTCGTTTTAGCAATGGAGGTCAAGGAACGCAAGGACAAGGTAATCAATCTTCCGGAGGTGACAGAAGAAATTATCAAGGAAGCCAGCACTATCGGCAGCAGCGCCCCTCAAGCTTTCAACGGAACCAAGCCCCACCGAGGAATTGCAAAAAGTGTGGGAAGCAACTCCATCCTGGCTTAGCTTGTGATGGCACCCCATTCACCTGCTATGACTGTGGAGGTAAGGGGCATAGATCCTTCGAGTGCCCAAAGAAGCAGGATGGTGCCTCACAACAGCAACCGCAGCAACGCCCCAACCATAGCCAAGGTAATGGTTTCCAGCGCAACCAGAACTATGGCCAGAACAATGGGGGTTATCGGCATAACCAGAATACAAACGGAGCCACCGGTGGATTTGCTAATGGCAATGGCAACCGTTCCAACCCACCTTTCAATGGCAACGACAACAGGAATGGAGGCAACAACGGGAGAATCTTTGTCATGAACGAGGTGCATGCCCAAGTTGAGCCAAACGTGGTCACTGGTACTTTTCTTCTATCCACTCACCCTGCTTATATACTTTTTGATTCTGGTGCTTCGCACTCTTTTATTTCAACATCGTTTGTCAAGAAGCACAATTTACAACATTCTTCCAAAGTAGACGCCAACATAGCCATACCATCAGGAGCCATTGTGTCTTGTACCTTACTACACCAAAATGTACCCCTTACCATCTCTGAGGTTGATCTTCCAGCCAACCTTATTGAATTTCCCTTAACCAATTTTGATGCTATTCTGGGAATGGACTGGCTAAGTAGGCATCGAGCCCGCATTGATTGTAGAGAGCAGAAGATAACTATGAAAGGACCACTTGGGCAACGAGTCTCATATAGGGGTATTGTGACACAACGACATGAACAGTTGGTGACAAGTATGATCATACCATCATGTGTGAGGAAAGGATGTCCATATTTCTTATTCCAAGCCACTGACACCTCGAAGGAAATGATCTTGGAAGATATTCCAGTGGTTCGGGAATTCGTTGAGGCATTTCCCGAAGAGTTACCTGGTATGCCGCCGAAGCGAGAATTGGATTTCTCTATTGATCTAGTGCCTGGTACAGCACCAATATCAAAGGCACCATACAGAATGGCACCAGCGGAGATGAAAGAGCTGAAGGTACAATTGGATGAGTTACTAGAAAAGGGCTATATTCGACAGAGTGTCTCACCCTGGGGAGCACCTGTTTTATTTGTGAAAAAGAAAGATGGTAGCATGAGGCTCTGCATTGATTACAGAGAACTCAACAAAGTTACAATCAAGAACAGGTACCCTTTGCCCAGGATCGAGGATCTTTTCGACCAGTTGAAGGGAGCCACGGTGTTTTCCAAGATAGATTTGCGATCCGGGTACCATCAACTGAGAATCAAGAGGATATACAAAAATCGGCTTTTAGGACGCGTTATGGTCACTATGAGTTCACTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_412974.p1 GENE.S_Transcript_412974~~S_Transcript_412974.p1 ORF type:complete len:734 (-),score=104.62,RVP_2|PF08284.7|3.3e-31,Retrotrans_gag|PF03732.13|2e-11,RVT_1|PF00078.23|2.8e-06 S_Transcript_412974:618-2819(-)
MSRRNNNVFDTPEMIVARLRATEELNQNMAAMLQRLAERQEVEDPAASMLKKIASHHPPTYDGKEDPAMLEHWIREMDKLFLAIGCPANLRVNSATFYLQNEADRWWVSEGPGLLESPDFGWEALKTALRDRFYPEHLKRQKYNEFVNLRQGRMTEYANKFTDLARFAPNLVPNEKAKAQKFEDGLNFHIQELMGGICSNTFQEAYGRAANLARILQRKEEVLGKNRKRDNGPSSHQGSHANDKRPRFSNGGQGTQGQGNQSSGGDRRNYQGSQHYRQQRPSSFQRNQAPPRNCKKCGKQLHPGLACDGTPFTCYDCGGKGHRSFECPKKQDGASQQQPQQRPNHSQGNGFQRNQNYGQNNGGYRHNQNTNGATGGFANGNGNRSNPPFNGNDNRNGGNNGRIFVMNEVHAQVEPNVVTGTFLLSTHPAYILFDSGASHSFISTSFVKKHNLQHSSKVDANIAIPSGAIVSCTLLHQNVPLTISEVDLPANLIEFPLTNFDAILGMDWLSRHRARIDCREQKITMKGPLGQRVSYRGIVTQRHEQLVTSMIIPSCVRKGCPYFLFQATDTSKEMILEDIPVVREFVEAFPEELPGMPPKRELDFSIDLVPGTAPISKAPYRMAPAEMKELKVQLDELLEKGYIRQSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNRYPLPRIEDLFDQLKGATVFSKIDLRSGYHQLRIKRIYKNRLLGRVMVTMSSL*

Click here to download the sequence:
Link to NCBI Protein BLAST