Transcript Information: S_Transcript_4131.p1


Annotated TAIR IDAT5G08720.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2841536-2845335 | Reverse length=719
E-Value4.4E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.752816955601
Replicate 231.417166162096
Replicate 331.792499022776
Condition 2: 8 Hour
Replicate 15.7997923456638
Replicate 25.5539596344091
Replicate 35.4404464598488
Condition 3: 24 Hour
Replicate 138.083827563797
Replicate 235.339109264095
Replicate 337.358174558205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4131.p1 GENE.S_Transcript_4131~~S_Transcript_4131.p1 ORF type:5prime_partial len:717 (+),score=120.41,Polyketide_cyc|PF03364.16|6.9e-19,Polyketide_cyc|PF03364.16|2.5e-20,Polyketide_cyc2|PF10604.5|0.0011,Polyketide_cyc2|PF10604.5|0.0002 S_Transcript_4131:3-2153(+)
AACGGTATCAACCACCTCTTACTCTCATTCCGAACTTCACTTCATCAAATTACCCAAAAAAAAAAAAAAAAAAAATCCTCAATGATCTCCTCCTCACTCATCTTCAACCCTAATTCCCACCTTCAAATTCTCAAACCCTTTTTTTTGGCGCAAAGCATTAATTACATTGCATCAAACCCTAGATTGTGCTTCAATGGCGGTGGTCAAAAGGCGAGGGTAGTGAACGGGTATCGAAATTGCAATGGATTAGTAGAAAGTTCTAGAAGGGATGTGGTGGAGGATTTGGAGAGAGAAATTCGTGATCGAAAGGTTCATTGTGAGGTTGATGTGATTTCTTGGAGAGAGCGTCGTATTAAGGCCGAGATTTTGGTGAATTCTGATGTTGAATCTGTTTGGAATGCTCTCACTGATTATGAGCGTCTCGCTGATTTCGTCCCCAATCTCGTTTGCAGTGGAAGAATCCATTGTCCATATCCTGATAGAATATGGTTAGAGCAAAGAGGCTTGCAAAGGGCGCTGTATTGGCATATAGAGGCCCGTGTTGTCTTGGATCTCCGAGAATTCCTTAACTCTTCAAATGATCGTGAACTGCACTTCTCCATGGTGGACGGGGACTTTAAAAAATTTGAAGGAAAATGGTCCGTCAAATCAAAGAAAAGGTCCTCACCAACAATACTATCTTATGAGGTCAATGTCATACCAATGTTCAATTTTCCTGCGATTTTCCTGGAGAGGATTATTCGATCAGACCTTCCTGTGAATCTTCGAGCTTTGGCTTGCAGAGCTGAGAGCAATTTTGAAGGGCTCCAGAAGATAGCCTTGACAGCTTCTTCAAAATCTGGGAGCACAGTCTTAGACATTACGTTAGAGGAAAGAGACATGTCTAACAGAGATCTTAAGAAGAGTTACTCTAATTCTTCCTCTGGGTCCTTGCCCCAGGCACCTTCTGAGTTGAACAGTAACTGGGGAGTATATGGTAAAGTTTGTAGGCTTGACAGGCCCTGCTTGGTGGATGAAATTCACCTCCGTAGATTGGATGGCTTATTGGAAAATGGTGGTGTTCATCGCTGTGTTGCTGCTAGCATAACAGTGAAAGCTCCCGTTCGTGAAGTCTGGAATGTTTTGACTGCTTATGAAAGTCTTCCAGAGATGGTTCCAAATCTAGCAATCAGCAAAGTGTTATCCAGAGATAACAACAAAGTTCGCATCGTACAGGAAGGATGCAAGGGCCTGTTGTATATGGTACTTCATGCTCGGGTCGTCATGGACTTGTGCGAACAGCTTGAGCAAGAGGTTAGTTTTGAACAGGTTGAAGGGGACTTTGACTCCTTTTGTGGAAGGTGGCAGCTTGAGCAGCTGGGAAACCAACACACACTGCTAAAATACTCTGTGGAATCAAAAATGCGCCAGGATACCTTTCTGTCAGAAGCGATTACGGAAGAGGTTATATATGAGGATCTTCCATCCAACCTGTGTGCTATCCGGGACTACATTGAGAAGAGGATAGGAACAAATTCCTCTGAGGTGTATGATCAAGAAAATGTGGAGCGGCAGTGTGGTGAAATACACCAAGAGCAGCGTAGCACTTCATCCAGTAAAGGAAGTGACACTGACCCCATTACACTCACAGAAAATGAAACAAGGGCTTCAAGTCTTATAAAACAAAGGCCTAGAGTTCCTGGTTTGCAACAGGATATTGAAGTTCTTAAATCTGAGATACTGTCATTTATTTCAGAGCATGGACAGGAAGGTTTTATGCCCATGAGGAAGCAACTTCGTGTTCATGGTAGGGTTGACATTGAGAAGGGGATCAATAGGATGGGTGGGTTTAGAAAAATTGCGTCCCTGATGAATCTCTCTCTGGCTTACAAACATCGAAAACCAAAGGGTTATTGGGATAACCTTGAAAATTTGCAGGAAGAAATTACTCGTTTTCAGAAGAACTGGGGGATGGATCCTTCATATATGCCCAGTAGAAAAGCCTTTGAACGTGCAGGACGTTATGACATTGCTCGTGCCCTGGAAAAATGGGGCGGCCTACATGAAGTTTCGCTTCTTTTGTCACTAAAACTGAGGCACCCAAACAGACAGGCAAGTCTATCTGGTGACAAGAAAAATGATTATGCTTCATCCCCAACTGCAGAGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4131.p1 GENE.S_Transcript_4131~~S_Transcript_4131.p1 ORF type:5prime_partial len:717 (+),score=120.41,Polyketide_cyc|PF03364.16|6.9e-19,Polyketide_cyc|PF03364.16|2.5e-20,Polyketide_cyc2|PF10604.5|0.0011,Polyketide_cyc2|PF10604.5|0.0002 S_Transcript_4131:3-2153(+)
NGINHLLLSFRTSLHQITQKKKKKKSSMISSSLIFNPNSHLQILKPFFLAQSINYIASNPRLCFNGGGQKARVVNGYRNCNGLVESSRRDVVEDLEREIRDRKVHCEVDVISWRERRIKAEILVNSDVESVWNALTDYERLADFVPNLVCSGRIHCPYPDRIWLEQRGLQRALYWHIEARVVLDLREFLNSSNDRELHFSMVDGDFKKFEGKWSVKSKKRSSPTILSYEVNVIPMFNFPAIFLERIIRSDLPVNLRALACRAESNFEGLQKIALTASSKSGSTVLDITLEERDMSNRDLKKSYSNSSSGSLPQAPSELNSNWGVYGKVCRLDRPCLVDEIHLRRLDGLLENGGVHRCVAASITVKAPVREVWNVLTAYESLPEMVPNLAISKVLSRDNNKVRIVQEGCKGLLYMVLHARVVMDLCEQLEQEVSFEQVEGDFDSFCGRWQLEQLGNQHTLLKYSVESKMRQDTFLSEAITEEVIYEDLPSNLCAIRDYIEKRIGTNSSEVYDQENVERQCGEIHQEQRSTSSSKGSDTDPITLTENETRASSLIKQRPRVPGLQQDIEVLKSEILSFISEHGQEGFMPMRKQLRVHGRVDIEKGINRMGGFRKIASLMNLSLAYKHRKPKGYWDNLENLQEEITRFQKNWGMDPSYMPSRKAFERAGRYDIARALEKWGGLHEVSLLLSLKLRHPNRQASLSGDKKNDYASSPTAEA*

Click here to download the sequence:
Link to NCBI Protein BLAST