Transcript Information: S_Transcript_413415.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value3E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.070488145551166
Replicate 30.29461239750161
Condition 2: 8 Hour
Replicate 10
Replicate 20.07147555475951
Replicate 30.068101749536682
Condition 3: 24 Hour
Replicate 10
Replicate 20.1448166873888
Replicate 30.16116322303589


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_413415.p1 GENE.S_Transcript_413415~~S_Transcript_413415.p1 ORF type:complete len:313 (-),score=30.17,RVT_3|PF13456.2|5.9e-17,zf-RVT|PF13966.2|2.5e-09,zf-RVT|PF13966.2|6.1e+03,RNase_H|PF00075.20|1.2e-05 S_Transcript_413415:113-1051(-)
ATGCATGATAGCATACTGTCTAATGCTAATCGCAAGAAGAGGCATTTATCTAATGATGCCTCATGCCAAGTCTGTGGACACCAGGAGGAAACTGCTTTACATATACTCTGGGATTGCCCCAAAGCGAAGTACATCTGGATGCAAATCATTCCAAGTCAGGCCATGCAGCGTTTCACGAGCCCTCCTCTCCAAGAGTGGATAGCTGCCAATATTGACAAGCTAGATGATTGGGCCACCCTTTTTGCCTACACAATTTGGTGGCTATGGCGCTGGCGTAACTGTAGAGCCATGGGCGACCCACATAGTATCCCAGACAATGGGGCTCGCTTCATACAGGACAAGGCGAATGAGTACCTTGAGGCCGACTCTAAGAGGTGCACGAGACTTCAAGGCACTAAGAGAGGTCGTTCGGAAGCTTTCATCTCCTGGATATCCCCCCCTATGGGGTGGATCAAATTAAACACCGATGGAGCGGCAAAGGGGAACCCCGGAATGGCAGGGGGCGGTGGAATCTTCAGAGCCTCCAATGGCGCATTTCTCAAAGCATACACTATCAAACTAGGTGTGTGCACTGCCTTTGAAGCTGAACTTCAAGCTATTATGCATGGATTACAACTGTTCCAACACATGCAAGGTGATAAACTTGTCCTCGAAACTGACTCTGAATTGGCCCGCTCTATGCTCCTTAAGAGAACGCCGCCTCACAGCCCTTACTACTTCATCCTGGAACGGTGCGAAGAACTGATGCAAAGGCTAGGAACTCAAGTCCAGGTTCAACATGTGTATCGTGAGGCCAATGCGGCGGCAGACTGGCTAGCAAATTTTAGTTATCAAATGCAGGAGTTTCTTTGTGTATTTACTGTCCCTCCCCCTAGCATGATAGATGTTCTTTTCCAAGATCAAATAGGAGTAGCTAGACCTAGGCAAATAAGCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_413415.p1 GENE.S_Transcript_413415~~S_Transcript_413415.p1 ORF type:complete len:313 (-),score=30.17,RVT_3|PF13456.2|5.9e-17,zf-RVT|PF13966.2|2.5e-09,zf-RVT|PF13966.2|6.1e+03,RNase_H|PF00075.20|1.2e-05 S_Transcript_413415:113-1051(-)
MHDSILSNANRKKRHLSNDASCQVCGHQEETALHILWDCPKAKYIWMQIIPSQAMQRFTSPPLQEWIAANIDKLDDWATLFAYTIWWLWRWRNCRAMGDPHSIPDNGARFIQDKANEYLEADSKRCTRLQGTKRGRSEAFISWISPPMGWIKLNTDGAAKGNPGMAGGGGIFRASNGAFLKAYTIKLGVCTAFEAELQAIMHGLQLFQHMQGDKLVLETDSELARSMLLKRTPPHSPYYFILERCEELMQRLGTQVQVQHVYREANAAADWLANFSYQMQEFLCVFTVPPPSMIDVLFQDQIGVARPRQISM*

Click here to download the sequence:
Link to NCBI Protein BLAST