Transcript Information: S_Transcript_413813.p1


Annotated TAIR IDAT4G25540.1
Annotated Gene NameHomolog of DNA mismatch repair protein MSH3
Annotated Gene Symbol(s)MSH3, ATMSH3
Annotation TypeHomolog
Chromosome Positionchr4:13042700-13048115 | Reverse length=1081
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32454879555098
Replicate 20.53811681847597
Replicate 30.22491141565366
Condition 2: 8 Hour
Replicate 12.0805258845983
Replicate 21.6369645346141
Replicate 31.2997468051818
Condition 3: 24 Hour
Replicate 10.53280203635596
Replicate 20
Replicate 31.2303436295179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_413813.p1 GENE.S_Transcript_413813~~S_Transcript_413813.p1 ORF type:3prime_partial len:82 (-),score=13.32 S_Transcript_413813:2-244(-)
ATGGCTAGTTTGAATTATCAGTTTCAGTGTCAGTTTGTACTGACAACTCCCTTATGTTCGGTGGTACAGTTCATTACTGTTGTTCAAGCTATGTTACTAGCTGCAAAGCAACTTCAGCAACTTGAAACTGGAGCTGTTCGTTCCACCTTACTGAGAAACTTGATTCAGACAGCTTCTTCATCTAGTGTGATCAGCTGTCCTTCTAAACTCTTATCAACGTTAAATAAAGAGGCTGCTCACAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_413813.p1 GENE.S_Transcript_413813~~S_Transcript_413813.p1 ORF type:3prime_partial len:82 (-),score=13.32 S_Transcript_413813:2-244(-)
MASLNYQFQCQFVLTTPLCSVVQFITVVQAMLLAAKQLQQLETGAVRSTLLRNLIQTASSSSVISCPSKLLSTLNKEAAHK

Click here to download the sequence:
Link to NCBI Protein BLAST