Transcript Information: S_Transcript_414123.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15383237708197
Replicate 20.25506115095393
Replicate 30.21321082177573
Condition 2: 8 Hour
Replicate 11.2326815212216
Replicate 20.25863408832054
Replicate 30.36963897580893
Condition 3: 24 Hour
Replicate 10.25254200567161
Replicate 20.13100469119276
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_414123.p1 GENE.S_Transcript_414123~~S_Transcript_414123.p1 ORF type:complete len:173 (+),score=1.24 S_Transcript_414123:61-579(+)
ATGGCAAACATGAACAGAAAAGGGTACGTCCTGAAAAGTGCCAGAGGTCCTTGCCCTCAAAGAGGCCCTATACACCACCCTATCCCGAACAAAAGCTGCAGGAGTGGACACACCATAAAACATCCGTGCATTTCGCTCCAACCAAACACTCCAAAGTACCGCCATGACAACACCCTCCAAAGTAATATCTGGTCTTTTCCCTACCAAAACCCATATACCCACATAACAAGCTGGTCACACCCAAACCTCGCCTCGCAATCCAAAGAGCCTCTTCCACAACCCTTGCGTCAAATCACACGTCATAAAAGATGGAAAGTAGACTCACTGTCCCTACCACACATGGCACAAACACCCGGAGAAAGAGCCCACCCTGGGCGCCGTCTCTGGAGCACATCATTGGTATTGATCCGACCTAAGGCAACCATCCACAAAAAAGCCCGTACCTTAGAAGGAACTTTGGACTTCCATATATTAGAAGCCACTGGGAAGGGAGAAGGATTAGGAATAGAACTAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_414123.p1 GENE.S_Transcript_414123~~S_Transcript_414123.p1 ORF type:complete len:173 (+),score=1.24 S_Transcript_414123:61-579(+)
MANMNRKGYVLKSARGPCPQRGPIHHPIPNKSCRSGHTIKHPCISLQPNTPKYRHDNTLQSNIWSFPYQNPYTHITSWSHPNLASQSKEPLPQPLRQITRHKRWKVDSLSLPHMAQTPGERAHPGRRLWSTSLVLIRPKATIHKKARTLEGTLDFHILEATGKGEGLGIELS*

Click here to download the sequence:
Link to NCBI Protein BLAST