Transcript Information: S_Transcript_41418.p1


Annotated TAIR IDAT5G43960.1
Annotated Gene NameNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17689154-17691653 | Reverse length=450
E-Value1.1E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.461515755628
Replicate 256.962998702699
Replicate 354.512157981616
Condition 2: 8 Hour
Replicate 156.56890042089
Replicate 252.0194976114
Replicate 357.816878680768
Condition 3: 24 Hour
Replicate 149.924258065893
Replicate 250.692728990458
Replicate 343.636368860179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41418.p1 GENE.S_Transcript_41418~~S_Transcript_41418.p1 ORF type:complete len:452 (+),score=115.55,NTF2|PF02136.16|6.5e-22,RRM_1|PF00076.18|1.2e-09,RRM_6|PF14259.2|6.9e-08 S_Transcript_41418:36-1391(+)
ATGGCGTCTGGGGCTGTTTCCTCCTTTGAGGTTGGTTCGTACTTTATAAATCAGTACTACAGAGTGTTGAAGGAGTCACCAGATTATTCTCATCAGTTTTACAAGGAGACTAGTACCGTTACTCGAGTTGATGGCGATGATTCTCAAACTGTTTCTAACATTATGGATATTCATGCGCTACTCACATCTCTAAATGTTACTGGAATTGAAGTCACAAAGCTAAGTTGCCAAGATTCATGGAATGGAGGCATTCTGCTTATAGTGTCGGGCTTTGTAAGGTCTGGTAACTTTCCTGGTAAGAGGAAGTTCACACAGGTCTTCTTCTTAGCTCCACAGGAGAAGGGTTACTTTGTCCTGAATGATGTTTTCCAGTTCAATGAGGAAGTCTCAGTTGCCCAGCATCCAGTGGCTGAGATACCTGAAATCAAGGTTGACTCTGAAGTGCATGCCTCTAGTCCTCACTTAGAGCAGCCAGTATCTAACTATGAGTTGGAAGAAGACACAAGGGAGTATGTTAATTCACTTCATATTGAAGAAGATAATCCCGTAGATAAATATAGCCTTCCGGATGAACAGCAGTATGAAGAACCTCAATCCGAAACCGTAGTAAAAGAAGCTCCTGTGGAAGAGCCTCCTCCAGTTGAGAGTGCAGTAGACCATGTGACCCATGTGGAAGACTCAATAGCTGTGCCTGCCCACGAGCCTGCTGGGGAGCCTACCAAGTTATCATATGCATCCATTTTGCGAGCAGCAAAGGGACATCCTGCACCACCAGTTGTGTCTCAACCAGCTGTGAGACAGAGTGCGCCACCTCCACCAGAGCAGCATCATATAGTACAAACGAGTTCTCCACAATTAAATCCATCAGCTTCATCATTTGTTCCTGAAGCAGGTGGTGCTGGGGCAGATGAAGGTCTAATTCAGGAAGAAGGCGAGCTGACATCAGTTTATGTAAGGAGCTTGCCCTCCAATGTTACAAATGCTGATCTTGAGAAGGAGTTCAAGAAGTTTGGTAGGATTAAACCTAATGGAGTCTTCATTAGGAATCGGAAGGAAATAGGAGTCTGCTTTGCATTTGTCGAGTTTGAAGACATGTCTGGTGTACACAATGCAATTAAGGCTTCTCCCATAGAGGTGCTTGGTAGGCAAGTTTTCATTGAGGAGAGGAGAGCAGGAAGCGGCGGAACTCGAGGTGGAGGAGTTGCACCAAGAGGCAGAGGCCGAGGTCGAGGCAGTTACCCAAATGAATCATCGAGGGGTCGTGGTGGCATCAGAAACCCTGGTCGAGGAAGTGTTCTTGATGGTACTGACTACAACAGAGTGAGAGGTAATGGGTTCCAGCAGCGTACCCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41418.p1 GENE.S_Transcript_41418~~S_Transcript_41418.p1 ORF type:complete len:452 (+),score=115.55,NTF2|PF02136.16|6.5e-22,RRM_1|PF00076.18|1.2e-09,RRM_6|PF14259.2|6.9e-08 S_Transcript_41418:36-1391(+)
MASGAVSSFEVGSYFINQYYRVLKESPDYSHQFYKETSTVTRVDGDDSQTVSNIMDIHALLTSLNVTGIEVTKLSCQDSWNGGILLIVSGFVRSGNFPGKRKFTQVFFLAPQEKGYFVLNDVFQFNEEVSVAQHPVAEIPEIKVDSEVHASSPHLEQPVSNYELEEDTREYVNSLHIEEDNPVDKYSLPDEQQYEEPQSETVVKEAPVEEPPPVESAVDHVTHVEDSIAVPAHEPAGEPTKLSYASILRAAKGHPAPPVVSQPAVRQSAPPPPEQHHIVQTSSPQLNPSASSFVPEAGGAGADEGLIQEEGELTSVYVRSLPSNVTNADLEKEFKKFGRIKPNGVFIRNRKEIGVCFAFVEFEDMSGVHNAIKASPIEVLGRQVFIEERRAGSGGTRGGGVAPRGRGRGRGSYPNESSRGRGGIRNPGRGSVLDGTDYNRVRGNGFQQRTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST