Transcript Information: S_Transcript_41489.p1


Annotated TAIR IDAT5G49400.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20031154-20031981 | Forward length=275
E-Value2.3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.687684928628
Replicate 215.58338295884
Replicate 314.260554295126
Condition 2: 8 Hour
Replicate 115.855308785973
Replicate 213.888842835815
Replicate 312.91629427365
Condition 3: 24 Hour
Replicate 117.946911715321
Replicate 213.648838198395
Replicate 319.783834087284


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41489.p1 GENE.S_Transcript_41489~~S_Transcript_41489.p1 ORF type:complete len:269 (+),score=79.53,zf-CCHC_3|PF13917.2|5.1e-20 S_Transcript_41489:294-1100(+)
ATGTCGAGTAAAAAGGAAGAGAAAGCACAGGCAGCAGCTGACCGAATCAAGGCTGCGGCCTTGTCAGCTGCAAAGGGTCTAAGCCGAGCCCAGGCTGAGAGAGCGGCAGCTGCTGCGGCCAGGAATGTAAATGCTTATGGACAGAAAGAAGAGGGACCGAGTAGATGGCAGGAGAGAAAAGAAGCCAAGAGGCAGATGTACTTGATGAGTACTGAAAAGGCTGTGAGATTGGGTGAGAGGAAAGATCCCAAGGCTAATATGTCTACCATAGGAGGGGTGGCTTCCCAGTGCCAAAAGTGCTTCCAAACAGGGCATTGGACTTACGAGTGCAAGAATGAGAGGGTGTACATCTCCCGGCCCTCTAGGAGCCAGCTTCTCAAAAACCCAAAACTTAGGCAGAAGATGATGGCCTCTTACAGCGAAGATAATCCTGATATTAAGGACGAAGAGGTGAACGAGAAGGATGAAAAGCGAGTGAAGAGGAGTAAGAGGAAGCACAGATCAGATACTGAGTCTGGTAGTGATAGTGAGGCATCTGTCTTTGATTCTGATAGCAGATCGTCTTCGGGTACTGGCTCAGATTTCTCATCAGCGGACGACAGTTCTTCGAGCTATAGCTCCTCTTCAGATTCGGAAGAGGAGAGGAGGAGGAGGAAGAGGAATACCAAGAAGAGGAAGCAGAAGGGAAGACGAAAGAAGTACAGCTCTTCATCTGATTCTTCTGACTATGAGTCTGACTCAAGCTCAGATTCTGATTCAGATCAAAAGAGTCGGAGAAAGAGTAAGAAGCACAGTCGTAGACGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41489.p1 GENE.S_Transcript_41489~~S_Transcript_41489.p1 ORF type:complete len:269 (+),score=79.53,zf-CCHC_3|PF13917.2|5.1e-20 S_Transcript_41489:294-1100(+)
MSSKKEEKAQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQERKEAKRQMYLMSTEKAVRLGERKDPKANMSTIGGVASQCQKCFQTGHWTYECKNERVYISRPSRSQLLKNPKLRQKMMASYSEDNPDIKDEEVNEKDEKRVKRSKRKHRSDTESGSDSEASVFDSDSRSSSGTGSDFSSADDSSSSYSSSSDSEEERRRRKRNTKKRKQKGRRKKYSSSSDSSDYESDSSSDSDSDQKSRRKSKKHSRRR*

Click here to download the sequence:
Link to NCBI Protein BLAST