Transcript Information: S_Transcript_4152.p1


Annotated TAIR IDAT3G47630.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17563254-17565162 | Reverse length=332
E-Value2.4E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7068108863287
Replicate 27.0916109292012
Replicate 34.8741516792373
Condition 2: 8 Hour
Replicate 18.1493455854758
Replicate 28.4693426993251
Replicate 36.3186262543338
Condition 3: 24 Hour
Replicate 17.8797615448215
Replicate 26.4753747360993
Replicate 35.7650387211694


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4152.p1 GENE.S_Transcript_4152~~S_Transcript_4152.p1 ORF type:3prime_partial len:280 (+),score=54.83,Mmp37|PF09139.7|6.1e-89 S_Transcript_4152:412-1248(+)
ATGGACGAGAAGAAAAGGGAGGAGCTTGCTAGTTTGTTGACTGCACTCCCTCCTGTGGAATTTTGTTGTGTGTATGGTTCAAGTCTTCATCCTAACAATCACGATAAGTCACGCATGATTGATTATATTCTTGGTGTGCGAGATCCTATTGACTGGCATTCACAGAATTTGAAGATGAACAGGAATCACTATGCCTCATGGATGGTTTGCCTTCGTGGTGCAAAACTGATTACTGAAGTTGCTGATGAAATTGGTGTTGGAGTGCACTTCAATCCCTTTGTTTCTTGGAATAACAAGGCAGTTAAGTACGGTGTAGTCCGAACACATGATTTGGTTGAAGACATTCTAAACTGGGAAAGGTTCTATTTGAGTGGCCGTCTACAAAAACCTGTTCATGTTCTTGTGGATAGCTTGGACATTGAACATCTAAATTTTTATAATTTAGGAGCTGCAACCTCAGCTGCTTTACTTCTTTTACCTTCCAATTTCACTGAGGAGGATCTTTATGCAAAAATCTGCAGCCTGTCTTACATGGGTGATTTGCGCATGCTCTTTGCAGAGGACAGGCAGAAGGTACAAAAGATTGTGCAAGGACAGTTTGATTTGTTTAGAAGAATGTATAAGCCAGTGTTGGAAGAATTTGCTACCAAAGACTTGTTAAGATTCTCGTCATCTAGTACTCACCCAGAGAAAATATCACAGGACTGTAGTTTACCTGCTCTTCAGTCCCTTGTATCTCGTCTTCCCAGAGCGGTCAGAAGCAATATGGGCATCAGGTTAGGAGAGAAGCCAAAGATGTACTCTGGTTGTATTGTTCCTGAAATTGTAATAAAATCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4152.p1 GENE.S_Transcript_4152~~S_Transcript_4152.p1 ORF type:3prime_partial len:280 (+),score=54.83,Mmp37|PF09139.7|6.1e-89 S_Transcript_4152:412-1248(+)
MDEKKREELASLLTALPPVEFCCVYGSSLHPNNHDKSRMIDYILGVRDPIDWHSQNLKMNRNHYASWMVCLRGAKLITEVADEIGVGVHFNPFVSWNNKAVKYGVVRTHDLVEDILNWERFYLSGRLQKPVHVLVDSLDIEHLNFYNLGAATSAALLLLPSNFTEEDLYAKICSLSYMGDLRMLFAEDRQKVQKIVQGQFDLFRRMYKPVLEEFATKDLLRFSSSSTHPEKISQDCSLPALQSLVSRLPRAVRSNMGIRLGEKPKMYSGCIVPEIVIKS

Click here to download the sequence:
Link to NCBI Protein BLAST