Transcript Information: S_Transcript_415492.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6707713779934
Replicate 21.780852968768
Replicate 31.902165605035
Condition 2: 8 Hour
Replicate 11.0519250829079
Replicate 21.304188485724
Replicate 30.57352056336273
Condition 3: 24 Hour
Replicate 12.7428553261733
Replicate 23.4554690295776
Replicate 32.7144801153488


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_415492.p1 GENE.S_Transcript_415492~~S_Transcript_415492.p1 ORF type:internal len:223 (-),score=24.24,PIF1|PF05970.10|6.9e-58 S_Transcript_415492:3-668(-)
GAGAATGTAGAGGCTGTTGATCACCTTCTACATGATATTTGCAGCTCAAATCAACCATTTGGTGGAAAGGTCGTTGTGTTTGGTGGAGACTTCAGGCAAGTTCTGCCTGTGATTCCGAAACGAACACAGCCTGGACTTGTCGATCATAGCCTTGTCAGCTCATATCTGTGGCCTACTTTTAAAAGATTCACACTGGTTGAAAACGTGCGCGCACGAGAAGATCCAAGGTTCACATCATTTTTACTAAGGCTAGGAAATGGGGAGTTACAACGGCATGAAAATGCAGACATTGAGCTACCACGGTCACTTCTTTCCAATCTTCCAGCAACTGAAAATGCGTTGCAGCATCTTGTCAACTTAGTCTACCCTGACGTGGCTCAGCTTGCATCTAATCCACATGCATTCACCTCGCGAGTTACGCTGACTCCAACCAATGATGAGGTTGACCGCATAAACAATCTAATGATAGCCAACTTCCCGGGTCAAGAACATAACTATAAGAGCTTTGACACCACTGTTGATGACGAGTGCAATGCTCATCCGATTGAGTTCCTCGATACTCTTTGTCCCGGAGGAATGAGTCCACATAATTTGACGTTGAAGCTCAATTGTCCAGTTATATTACTGTGTAATCTGAACCCAGCACTAGGCCTGTGCAATGGAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_415492.p1 GENE.S_Transcript_415492~~S_Transcript_415492.p1 ORF type:internal len:223 (-),score=24.24,PIF1|PF05970.10|6.9e-58 S_Transcript_415492:3-668(-)
ENVEAVDHLLHDICSSNQPFGGKVVVFGGDFRQVLPVIPKRTQPGLVDHSLVSSYLWPTFKRFTLVENVRAREDPRFTSFLLRLGNGELQRHENADIELPRSLLSNLPATENALQHLVNLVYPDVAQLASNPHAFTSRVTLTPTNDEVDRINNLMIANFPGQEHNYKSFDTTVDDECNAHPIEFLDTLCPGGMSPHNLTLKLNCPVILLCNLNPALGLCNGT

Click here to download the sequence:
Link to NCBI Protein BLAST