Transcript Information: S_Transcript_415493.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.90405569037258
Condition 2: 8 Hour
Replicate 10.20907245408954
Replicate 21.9739866446818
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.22219423114066
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_415493.p1 GENE.S_Transcript_415493~~S_Transcript_415493.p1 ORF type:3prime_partial len:102 (+),score=7.82,PIF1|PF05970.10|1.9e-22 S_Transcript_415493:144-446(+)
ATGCTGACTCCAACCAATGATGCGGTTGACTGCATAAACAAGCTAATGATAGCCAACTTCCTGGGTCAAGAACATAACTATAAGAGTTTTGACAACATTGTTGATGACGATTGCAATGCTCATCCGGTTGAGTTCCTCAATACTCTTTGCCCCGGAGGAATGAGCCCACATAATTTGACGTTGAAGCTCAATTGTCCAGTTATATTGTTGCGTAATCTGAACCCAGCACTTGGTCTGTGCAATGGAACTCGACTGATTTGCAGAGGGTTCAAGCCAAATCTGGTTATATGTGAAATCGCAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_415493.p1 GENE.S_Transcript_415493~~S_Transcript_415493.p1 ORF type:3prime_partial len:102 (+),score=7.82,PIF1|PF05970.10|1.9e-22 S_Transcript_415493:144-446(+)
MLTPTNDAVDCINKLMIANFLGQEHNYKSFDNIVDDDCNAHPVEFLNTLCPGGMSPHNLTLKLNCPVILLRNLNPALGLCNGTRLICRGFKPNLVICEIAT

Click here to download the sequence:
Link to NCBI Protein BLAST