Transcript Information: S_Transcript_41561.p1


Annotated TAIR IDAT5G06710.1
Annotated Gene Namehomeobox from Arabidopsis thaliana
Annotated Gene Symbol(s)HAT14
Annotation TypeOrtholog
Chromosome Positionchr5:2068305-2070284 | Reverse length=336
E-Value1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3266251543976
Replicate 22.2564216592913
Replicate 31.2574592784273
Condition 2: 8 Hour
Replicate 11.2924478980081
Replicate 20.84741850908055
Replicate 31.6148369397713
Condition 3: 24 Hour
Replicate 11.2411865619656
Replicate 21.0301732534703
Replicate 31.6241467988143


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41561.p1 GENE.S_Transcript_41561~~S_Transcript_41561.p1 ORF type:complete len:264 (+),score=56.61,Homeobox|PF00046.25|5.9e-17,HALZ|PF02183.14|1.5e+03,HALZ|PF02183.14|4.8e-09 S_Transcript_41561:73-864(+)
ATGAGTTCAGATGATGGATGTAATTTAACAGCCCTAGCACTAGGGCTAAGCTTCTCAATTGATCATCATAATCAAAATCCACAAGTTACCAAAGAGAAGGAAATCAAAGAGCATAAGGAAAGTGGTTTGAAATTTGACAATGCTTTGCCTTCTCTTTCATTAGGATCTCAGCAAGAAGAAATCAATATTGCTTGTTTCCAGACACCAAATAACATTAGTCCCGATGTATCATCGTACTCAAACTCGTGCTCAGTGGTGAAGAAATTTAAAGAAAAGGTTGGGGTTGTAATTCACGAAGATTTCGAGGTCGAAAAAGCAGCAGTTTCTTCAAGGGGGAGTGATGAAGATGAAGAGGCTAGTCCCAGAAAGAAGCTTAGACTTACCAAGGAACAGTCTGCTGTTTTAGAAGATAGCTTCAAGGAACACAGCACTCTCAACCCTAACGAGAAACAGGAGTTGGCAAGGCAACTGAAGCTGCGGCCAAGACAAGTGGAGGTGTGGTTCCAAAACAGAAGAGCCAGAACAAAGCTGAAACAAACAGAGATGGACTGTGAGTTACTAAAGAAGTGCTGTGAAAATCTAACAGAGGAGAACAAAAGGCTTCATAGGGAGCTCCAAGAGCTGAAGGCCCTTAAGCTTGTAGGCCCCACCACCACCCCAGCTGCCACCGTCTTTATGCAAATGCCTGCCGCCACCCTCTCCATGTGCCCGTCCTGCGACCGGATCAACGCTGCAACCAACACCACTGGTGGCGGTGGCTCCGGTGGGAATCACTTTGTCCGAACTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41561.p1 GENE.S_Transcript_41561~~S_Transcript_41561.p1 ORF type:complete len:264 (+),score=56.61,Homeobox|PF00046.25|5.9e-17,HALZ|PF02183.14|1.5e+03,HALZ|PF02183.14|4.8e-09 S_Transcript_41561:73-864(+)
MSSDDGCNLTALALGLSFSIDHHNQNPQVTKEKEIKEHKESGLKFDNALPSLSLGSQQEEINIACFQTPNNISPDVSSYSNSCSVVKKFKEKVGVVIHEDFEVEKAAVSSRGSDEDEEASPRKKLRLTKEQSAVLEDSFKEHSTLNPNEKQELARQLKLRPRQVEVWFQNRRARTKLKQTEMDCELLKKCCENLTEENKRLHRELQELKALKLVGPTTTPAATVFMQMPAATLSMCPSCDRINAATNTTGGGGSGGNHFVRTC*

Click here to download the sequence:
Link to NCBI Protein BLAST