Transcript Information: S_Transcript_415648.p1


Annotated TAIR IDAT1G03510.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:876258-877547 | Reverse length=429
E-Value3.3E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56356943792147
Replicate 20.31147467610609
Replicate 30.21697336568942
Condition 2: 8 Hour
Replicate 10.75266083472234
Replicate 21.2107118087382
Replicate 32.2068171638098
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.29672993417784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_415648.p1 GENE.S_Transcript_415648~~S_Transcript_415648.p1 ORF type:complete len:425 (+),score=72.26,PPR|PF01535.16|12,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|25,PPR|PF01535.16|2.8,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|3.2,PPR|PF01535.16|0.043,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|0.012,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|4.6e+03,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|5.7e+03,PPR_2|PF13041.2|1.3,PPR_3|PF13812.2|26,PPR_3|PF13812.2|4.7e+02,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.72,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|0.6,PPR_1|PF12854.3|8.8e+02,PPR_1|PF12854.3|7.8e+02,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|2.1e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|23,TPR_14|PF13428.2|7.6e+03,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|0.96,TPR_14|PF13428.2|36 S_Transcript_415648:142-1416(+)
ATGAGTTCCTACAACTCAAACTTCCTACGCTTGCTTTCTTACACCAAACAATTGACTTCCTACGTTAACAAAGGCCATCATTTGCAAGCTATTTCTCTCTTTCACCATATGCATTCCTCTCTAGCTCTTCCTCTTGACCCTTTTGTCTTTCCTCTCACTCTCAAGTCTTGCTCTGCCCTCAACTGTCCTCTTCTTGGCACTTCCATTCATGCCCATGTTGTTAAATCATCTCTCCTGTCAAACCCATTTGTGGGCTGTGCTCTCGTTGACTTTTATGGGAAATGCGTGTCTTTATTTTCTGCACGCCAAGTGTTCGATGAAATTCCCCACAGAAATGTGGTTGTTTGGAATTCCATGATTTCACTCTATGCGCATTTTAACAATGTCCCTATGGCTTTGAGGCTGTTTGAGTCGATGGATGTTGTTCCTAGTGTTTCCACGTTCAATTCGATCATCGATAGTTTGTCGAGAAGAGAGGATGGGTCATATGAGGCTCTTAAGTTCTATAGAAAATTGGGGAGTTTTGGGCTCAAGGCGAATTTAATCACTGCTCTTGCTTTGCTTCCTGCCTGTGCAGGTATAGGAGCTCTTAGGTTGATTAAAGAGATTCAAGGGTATTCCATACGAAATGATATTGACCCGAATCCGCAATTAAGGAGTTGCCTTGTGGAAGTATATGGGAGATGTGGGTGTCTTGGTTATGCTAGTTACATATTCCGAAGTATGGATGAGAAAGATGTAGTGGCGTGGAGTTGCTTGATTTCAGCCTATGCTCTTCATGGGGAGGCAAGGACTGCACTAGAGATCTTTCAGGAAATGGAATGTGCAAAAGTAAAGCCTGATGGAATCACTTTCTTGGGTGTGCTTAAAGCTTGTAGTCATGCAGGATTAGCGGATGAAGCGAAGGTATACATTGCTAGGATGCAAGTGATATATGGTGTGGAAGTAACTAGTGATCACTACTCTTGTTTCGTGGATGTGCTAAGTAGAGCAGGGCGATTATCTGAAGCATATGATGTATTAACAAAAATGCCTGTGAAGGCAACTGCAAAAGCTTGGGGTGCTCTCTTAGGAGCCTGCAGAACTTATGGGGATGTGGAGATGGCAGAGATTGCTGGAAGGGCGTTGTTTGAGATAGAACCTGATAATGCTGCTAATTATGTGCTATTAGCTAGAATTTATGCAAGTGCTGGTAGATATGAAGAGTCGATGAACCTGAGGAGGGAAATGAAGGAGAGACGGGTGAAGATAGCTCCAGGAAGCAGTTGGGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_415648.p1 GENE.S_Transcript_415648~~S_Transcript_415648.p1 ORF type:complete len:425 (+),score=72.26,PPR|PF01535.16|12,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|25,PPR|PF01535.16|2.8,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|3.2,PPR|PF01535.16|0.043,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|0.012,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|4.6e+03,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|5.7e+03,PPR_2|PF13041.2|1.3,PPR_3|PF13812.2|26,PPR_3|PF13812.2|4.7e+02,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.72,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|0.6,PPR_1|PF12854.3|8.8e+02,PPR_1|PF12854.3|7.8e+02,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|2.1e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|23,TPR_14|PF13428.2|7.6e+03,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|0.96,TPR_14|PF13428.2|36 S_Transcript_415648:142-1416(+)
MSSYNSNFLRLLSYTKQLTSYVNKGHHLQAISLFHHMHSSLALPLDPFVFPLTLKSCSALNCPLLGTSIHAHVVKSSLLSNPFVGCALVDFYGKCVSLFSARQVFDEIPHRNVVVWNSMISLYAHFNNVPMALRLFESMDVVPSVSTFNSIIDSLSRREDGSYEALKFYRKLGSFGLKANLITALALLPACAGIGALRLIKEIQGYSIRNDIDPNPQLRSCLVEVYGRCGCLGYASYIFRSMDEKDVVAWSCLISAYALHGEARTALEIFQEMECAKVKPDGITFLGVLKACSHAGLADEAKVYIARMQVIYGVEVTSDHYSCFVDVLSRAGRLSEAYDVLTKMPVKATAKAWGALLGACRTYGDVEMAEIAGRALFEIEPDNAANYVLLARIYASAGRYEESMNLRREMKERRVKIAPGSSWV*

Click here to download the sequence:
Link to NCBI Protein BLAST