Transcript Information: S_Transcript_415649.p1


Annotated TAIR IDAT1G03510.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:876258-877547 | Reverse length=429
E-Value9E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.86820927499778
Replicate 20.6261840586183
Replicate 30.48814918179347
Condition 3: 24 Hour
Replicate 10.22233978107475
Replicate 20.057668731746431
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_415649.p1 GENE.S_Transcript_415649~~S_Transcript_415649.p1 ORF type:5prime_partial len:393 (+),score=68.83,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|5.3e-05,PPR|PF01535.16|23,PPR|PF01535.16|2.5,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.9,PPR|PF01535.16|0.039,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|0.01,PPR_2|PF13041.2|5e-05,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|4.2e+03,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|5.2e+03,PPR_2|PF13041.2|1.1,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|0.54,PPR_1|PF12854.3|7.1e+02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|4.3e+02,PPR_1|PF12854.3|0.036,PPR_1|PF12854.3|1.9e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|21,TPR_14|PF13428.2|6.4e+03,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|0.86,TPR_14|PF13428.2|32 S_Transcript_415649:1-1179(+)
TCTTTCACCACATGCATTCCTCTCTTGCTTTTCCTCTTGAACCTTTTGTCTTTCCTCTCGCTCTCAAGTCTTGCTCAGCCCTTAACTTCCATCTTCTTGGCAATTTCCATTCATACCCATGTTGTTAAATCATCTCTCCTGTCAAACCCATTTGTGGGCTGTGCTCTCGTTGACTTTTATGGGAAATGCGTGTCTTTATTTTCTGCACGCCAAGTGTTCGATGAAATTCCCCACAGAAATGTGGTTGTTTGGAATTCCATGATTTCACTCTATGCTCATTTTAACAATGTCCCAATGGCTTTGAGGCTTTTTGAGTCGATGGATGTTGTTCCTAGTGTTTCCACGTTCAATTCGATCATCGATAGTTTGTCGAGAAGAGAGGATGGGTCATATGAGGCTCTTAAGTTCTATAGAAAATTGGGGAGTTTTGGGCTCAAGGCGAATTTAATCACTGCTCTTGCTTTGCTTCCTGCCTGTGCAGGTATAGGAGCTCTTAGGTTGATTAAAGAGATTCAAGGGTATTCCATACGAAATGATATTGACCCGAATCCGCAATTAAGGAGTTGCCTTGTGGAAGTATATGGGAGATGTGGGTGTCTTGGTTATGCTAGTTACATATTCCGAAGTATGGATGAGAAAGATGTAGTGGCGTGGAGTTGCTTGATTTCAGCCTATGCTCTTCATGGGGAGGCAAGGACTGCACTAGAGATCTTTCAGGAAATGGAATGTGCAAAAGTAAAGCCTGATGGAATCACTTTCTTGGGTGTGCTTAAAGCTTGTAGTCATGCAGGATTAGCGGATGAAGCGAAGGTATACATTGCTAGGATGCAAGTGATATATGGTGTGGAAGTAACTAGTGATCACTACTCTTGTTTCGTGGATGTGCTAAGTAGAGCAGGGCGATTATCTGAAGCATATGATGTATTAACAAAAATGCCTGTGAAGGCAACTGCAAAAGCTTGGGGTGCTCTCTTAGGAGCCTGCAGAACTTATGGGGATGTGGAGATGGCAGAGATTGCTGGAAGGGCGTTGTTTGAGATAGAACCTGATAATGCTGCTAATTATGTGCTATTAGCTAGAATTTATGCAAGTGCTGGTAGATATGAAGAGTCGATGAACCTGAGGAGGGAAATGAAGGAGAGACGGGTGAAGATAGCTCCGGGAAGCAGTTGGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_415649.p1 GENE.S_Transcript_415649~~S_Transcript_415649.p1 ORF type:5prime_partial len:393 (+),score=68.83,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|5.3e-05,PPR|PF01535.16|23,PPR|PF01535.16|2.5,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.9,PPR|PF01535.16|0.039,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|0.01,PPR_2|PF13041.2|5e-05,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|4.2e+03,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|5.2e+03,PPR_2|PF13041.2|1.1,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|0.54,PPR_1|PF12854.3|7.1e+02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|4.3e+02,PPR_1|PF12854.3|0.036,PPR_1|PF12854.3|1.9e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|21,TPR_14|PF13428.2|6.4e+03,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|0.86,TPR_14|PF13428.2|32 S_Transcript_415649:1-1179(+)
SFTTCIPLLLFLLNLLSFLSLSSLAQPLTSIFLAISIHTHVVKSSLLSNPFVGCALVDFYGKCVSLFSARQVFDEIPHRNVVVWNSMISLYAHFNNVPMALRLFESMDVVPSVSTFNSIIDSLSRREDGSYEALKFYRKLGSFGLKANLITALALLPACAGIGALRLIKEIQGYSIRNDIDPNPQLRSCLVEVYGRCGCLGYASYIFRSMDEKDVVAWSCLISAYALHGEARTALEIFQEMECAKVKPDGITFLGVLKACSHAGLADEAKVYIARMQVIYGVEVTSDHYSCFVDVLSRAGRLSEAYDVLTKMPVKATAKAWGALLGACRTYGDVEMAEIAGRALFEIEPDNAANYVLLARIYASAGRYEESMNLRREMKERRVKIAPGSSWV*

Click here to download the sequence:
Link to NCBI Protein BLAST