Transcript Information: S_Transcript_41600.p1


Annotated TAIR IDAT5G54730.1
Annotated Gene NameHomolog of yeast autophagy 18 (ATG18) F
Annotated Gene Symbol(s)ATATG18F, ATG18F, G18F
Annotation TypeHomolog
Chromosome Positionchr5:22233977-22236804 | Reverse length=763
E-Value3E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.592372737336
Replicate 217.971510037748
Replicate 321.233275217979
Condition 2: 8 Hour
Replicate 124.285228336121
Replicate 223.797131374453
Replicate 322.31010215766
Condition 3: 24 Hour
Replicate 128.828287655392
Replicate 220.910524673968
Replicate 322.610888499695


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41600.p1 GENE.S_Transcript_41600~~S_Transcript_41600.p1 ORF type:complete len:879 (+),score=174.05,BCAS3|PF12490.4|8e+03,BCAS3|PF12490.4|4e-75 S_Transcript_41600:831-3467(+)
ATGAGGAATGATGGGCAGAAACCTCAGGGAGCTTCGGGCCGGGCCAACGGGTTCTTGCCCAGCTCGTTTCGGGCCATTTCCAGCTACCTGAGGATTGTTTCATCTGGGGCTTCAACGGTTGCTTCTACCGTCCGGTCGGCCGCTTCATCGATTGTGGTAGACAGGGAGGATCATGCCCTCTATGACCAGGTGCTTTGGGCTGGGTTTGACAAGTTGGAAGGCGAGAGAGATGTCATACGACGGATCCTGCTATTGGGTTATCAATCTGGTTTTCAGGTGTGGGATGTGGAGGAAGCACACTATGTCCGTGACCTGGTTTCCAGATATGATGGTCCTGTTTCCTTTTTGCAAATGCTGCCGAAGCCGTTGCCAACTCTGGCATCAGGAGACAAGTTTTCTGATAATCGCCCTCTGCTGGTAGTATGTACAGATGGATCTCTTCTACATGATGGGATAAATACTCCTCGCATTTCCAATTTCCATGACCCTGGGAATGGCTACTATGCTCCTTCAAATGTTCGATTTTATTCTATATCTTCCCAATCTTATGTACATGTACTGAAGTTCAGATCAGTTGTTTATTCTGTTAGGTGCAGTTCTCGGGTTGTGGCTGTTTCTCAGGCAGCTCAGGTGCACTGTTTCAATGCTGCTACTTTGGAGAAGGAATATACCATTCTCACGAATCCTGTTGTTACTGGTGGTCCTGATTCTGGAGGTATAGGTTATGGACCTCTTGCTCTTGGTCCCAGGTGGTTAGCATATAGTGGAAGTCCGATAGAGGTTTCAAATGCAGGTCGCGTCAGTCCACAGCATCTGACACCTTCAGCAACTTTTCCTAGTGCTGAGTCAAATGGTATCCGTGTGGCTCACTATGCAAAGGAGTCAAGCAAGCATCTTGCTGCAGGAATAGTGAACCTGGGGGATAAAGGATATAAAAAACTGTCTCGATATTGCTCTGAGCTGATGCCTGATTCTAATCATGCTATGCATTCTGGGGTTAACGGTGGAAAAGCCAATGGCACTATCAATGGCCATCTGCCTGGCTCAGATAACATTGGAATGGTCATTGTAAAAGATGTTGTCAGTAAGACTGTGATTACTCAGTTTAGAGCACACAAAAGCCCTATTTCCGCATTGTGCTTTGATCCTAGTGGGGTCCTACTGGTGACAGCTTCAGTTCAGGGGCATAACATCAATGTTTTCCGTATAATACCGGGAACCGGAAGCCTTGGAGATTCTTCTACTTCTGGTACCAGTGGATCCTATGTCCATCTTTACAGATTGCAACGTGGTCTTACCAATGCGATAATACAAGATATTACTTTCAGTGATGACAGCTGCTGGATCATGATTAGTTCGTCTAGGGGTACCAACCATCTCTTTGCTATTTCCCCATTTGGTGGAAGTGTGGACCTTCAGTTTGTTGATACCAGTTCTAAACGTAATAGATTGAGTATTATGGGTGATCATGAGGTCCGATGGCAGCCCAAACCTACTGTTCAAATGTTTAATCAGAAGAACCTTTTCACGTCCGGTCCTCCAGTTACTCTTTCCGTGGTTAGCAGAATTAGAAATGGAAGCAACGGGTGGAGAGGTACTGTTAATGGTGCTGCAGCTGTTGCAACAGGCAAGAATAATTATGTGTCTGGTGCTGTTGCAGCTGCTTTCCACCTCTGCAAAAGCAATGATATGCATGTCAATGCCTTTGATTTGAAGTCTAAGTACCACCTGTTGGTTTTTTCTCCATCTGGCTGTTTGGTCCAGTATGCGTTGAGGGTCTCTCTTGGTGTAGACACTGTATCAACTGTTATTGGAGTAAGCCCAGCTTATGAGTCAGTTCCCGGGAATGATTCAAAGTTAATAGTCGAGGCTCTTCAAAAATGGAATATTTGTCAAAAGCGGAGGGAACGAGAAGATTACTTCGATATATATGGTGAAAATGGGAGCTCAGATTCTCGTAAAATAATTCACGAAGAGACTAGAAATGGATATGTTACTACTGCTGAGACCAAGGGTATGATCATCAGAACAAAGATGATTCCTGAAGAAAAAAACCATTATTATATTTCTGAAGCTGAATTGCAAATGCATGAACAGCAGGTTTCACTTTGGGCAAGATCTGAGATTTACTTTCAGTCAATAACGATTGATGGCGTCAAACTAGATGGGGAAAATGCTGGAGGGGAGTTCGAGATTGAAAAAATTCCTGCTCGTACGATTGAAGCTAGGTCCAAGGGTTTGGTTCCTGTTCATGATCATCTAGACAATGGCAAATCTCAACCGGCAAGAATCGCTGTTTCAGATAGCAAGTTTGAACCAGAGCTGCTGCCTCAGGTGTCTGGCTTCTCTCCACTTGGGAATCTTTTGACAGGCAGCAAACTTAATGCTTTTGACTTGACTGAAAATGGAGTGGAGTTCCATGGTGAAACCAAGGATGGTCCATTGAAGCATGCAGATATAAGTCTGGGCTCTGTAAATACTAATGACTGCCCTAAAACTATATCTGAGCTTCAGATTGTAAATAATAGAGATAGAGAGAACTTGAAAATGGAGGCCCGTCACAAGTTTGTAAATAATTATAGCGGAGCCTCAAAGATGGAGAATCAGTTTGAAGGCAAAGGCAGAGAGTTTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41600.p1 GENE.S_Transcript_41600~~S_Transcript_41600.p1 ORF type:complete len:879 (+),score=174.05,BCAS3|PF12490.4|8e+03,BCAS3|PF12490.4|4e-75 S_Transcript_41600:831-3467(+)
MRNDGQKPQGASGRANGFLPSSFRAISSYLRIVSSGASTVASTVRSAASSIVVDREDHALYDQVLWAGFDKLEGERDVIRRILLLGYQSGFQVWDVEEAHYVRDLVSRYDGPVSFLQMLPKPLPTLASGDKFSDNRPLLVVCTDGSLLHDGINTPRISNFHDPGNGYYAPSNVRFYSISSQSYVHVLKFRSVVYSVRCSSRVVAVSQAAQVHCFNAATLEKEYTILTNPVVTGGPDSGGIGYGPLALGPRWLAYSGSPIEVSNAGRVSPQHLTPSATFPSAESNGIRVAHYAKESSKHLAAGIVNLGDKGYKKLSRYCSELMPDSNHAMHSGVNGGKANGTINGHLPGSDNIGMVIVKDVVSKTVITQFRAHKSPISALCFDPSGVLLVTASVQGHNINVFRIIPGTGSLGDSSTSGTSGSYVHLYRLQRGLTNAIIQDITFSDDSCWIMISSSRGTNHLFAISPFGGSVDLQFVDTSSKRNRLSIMGDHEVRWQPKPTVQMFNQKNLFTSGPPVTLSVVSRIRNGSNGWRGTVNGAAAVATGKNNYVSGAVAAAFHLCKSNDMHVNAFDLKSKYHLLVFSPSGCLVQYALRVSLGVDTVSTVIGVSPAYESVPGNDSKLIVEALQKWNICQKRREREDYFDIYGENGSSDSRKIIHEETRNGYVTTAETKGMIIRTKMIPEEKNHYYISEAELQMHEQQVSLWARSEIYFQSITIDGVKLDGENAGGEFEIEKIPARTIEARSKGLVPVHDHLDNGKSQPARIAVSDSKFEPELLPQVSGFSPLGNLLTGSKLNAFDLTENGVEFHGETKDGPLKHADISLGSVNTNDCPKTISELQIVNNRDRENLKMEARHKFVNNYSGASKMENQFEGKGREFD*

Click here to download the sequence:
Link to NCBI Protein BLAST