Transcript Information: S_Transcript_416002.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25713044671672
Replicate 20.10658352443244
Replicate 30
Condition 2: 8 Hour
Replicate 10.41208483704605
Replicate 20.32422969043082
Replicate 30.20595021840562
Condition 3: 24 Hour
Replicate 10.63318502871287
Replicate 20.54743506223061
Replicate 30.36553687543647


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_416002.p1 GENE.S_Transcript_416002~~S_Transcript_416002.p1 ORF type:5prime_partial len:207 (+),score=40.17,RVT_1|PF00078.23|8.1e-26 S_Transcript_416002:2-622(+)
TTTGAGAAGGCTTATGACAGAGTTAGCTGGTCTTTTCTTGATAGGGTGTTAGATCGGAAGGGGTTTGGGGGGAGGTGGAGGCAGTGGGTTAGAGGGTGTTTCTCTAATGCCTTTTTCTCGGTGTTGGTGAACGGTGCTTCTAGGGAATGGTTTTCTTCCTCTCGGGGGTTGCGGCAGGGGGATCCTCTGTCCCCGTTCCTTTTTACCCTGGTGGTTGATGTCTTGAGTAGGATGTTGGAGAGAGCAGTGGACAAGGGAGTGGTTGCTGGTTTTTCGGTGGGGAGGGAGGCTATGATGGTTTCCCACTTGCAGTTTGCGGATGATACAATCCTGTTTCTGGATGATGACTTTGGGCATTTCAAGAACGTGCTGACTCTTCTCCAACTTTTTGAGGCTATTTCCGGGATGCGGGTTAACCTTGGAAAGTGTAGTGTCGCTGGGGTTAATATGAGTCACGAGGAGCTTGTGGGTTTTGTTGAGGTCGTGGCTTGTCAGATCCAGAGCTGGCCTTTGTCTTATTTGGGTATCCCACTTGGGGGTAATCCAAGGACGGTGTCTTTTTGGGAGCCTGTGGTTAGTCGAGTGAGGAGGAGGTTGGATGGATGGAAGAAGGTCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_416002.p1 GENE.S_Transcript_416002~~S_Transcript_416002.p1 ORF type:5prime_partial len:207 (+),score=40.17,RVT_1|PF00078.23|8.1e-26 S_Transcript_416002:2-622(+)
FEKAYDRVSWSFLDRVLDRKGFGGRWRQWVRGCFSNAFFSVLVNGASREWFSSSRGLRQGDPLSPFLFTLVVDVLSRMLERAVDKGVVAGFSVGREAMMVSHLQFADDTILFLDDDFGHFKNVLTLLQLFEAISGMRVNLGKCSVAGVNMSHEELVGFVEVVACQIQSWPLSYLGIPLGGNPRTVSFWEPVVSRVRRRLDGWKKVY*

Click here to download the sequence:
Link to NCBI Protein BLAST