Transcript Information: S_Transcript_41609.p1


Annotated TAIR IDAT1G79740.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30004367-30006715 | Reverse length=651
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58638816280906
Replicate 21.1592313157338
Replicate 31.8130147336421
Condition 2: 8 Hour
Replicate 11.1204866098833
Replicate 20.94795968812401
Replicate 31.2283708789311
Condition 3: 24 Hour
Replicate 11.2588576926783
Replicate 21.5365295983964
Replicate 31.3252260619637


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41609.p1 GENE.S_Transcript_41609~~S_Transcript_41609.p1 ORF type:complete len:590 (+),score=91.73,DUF659|PF04937.11|1.3e-51 S_Transcript_41609:187-1956(+)
ATGGCTTCTAGTGGTACTTCTAACCCAAATACAAGTAGTAGTGGAAGTGTGACATCAAACACACCTAGTGAATTAGGACCTTTGTGGCAATTTGTGACTAAAGTTAATAAATCAGCCGAAAAAGGGGGCACTTGGAGATTTATTTGTAATTTTTGTAATGAGTCAAAACAAGGAAGTTATTCTAGAGTGAAAGCTCACTTGCTTCAAATACCGAGGCAAGGAATCGCAATTTGTAAAAAGGTTCAACATAATGATTTGCTTGAGATGAGAAGGATAGACAAAGAATTTGAGGAAAGTAAGACAAACCTAGGTCCTCAAGATTGTAGTGGAACACAAATGGAATCGAATGCACTTTCAAAGAAAAGAAAATCCGACTTACCTCCTTTAGAAAGATCTTTTAATTTGGATGCTAGAAGTCAATTGGATCAAGAAATTGCAAGAATGTTTTTCAGTGGTGGTTTACCATTTAACCTTGCTAGAAATCCACACTATGTAAGGTCTTATTCTGCTGCAAGTCACAATTTGAGTGGTTACATGCCTCCGGGTTATAATAAATTGAGAACCACGTTGCTCCAACAAGAGAAGGGAAATGTGGAAAGGTTATTAGAACCTCTCAAAGCAACTTGGCCCGAGAAAGGAGCGACACTTGTCAGTAATGGATGGAGCGATCCTCAAAGGAGGCCACTAATTAATTTCATGGCCACTTCTAGGAATGGCCCTATGTTTCTTAAAGCTGTCAATTGCATGGGTGAAGTCAAAAGTAAGGAGTTCATTGCTGATTTAATGAAAGAAGTCATTGATGAGATAGGTCATGAGAGTGTTGTCCAAATTGTAACTGATAATGCAAGAAATTGCAAGGGGGCGGGGGAAATAATTGAGGGTATTTATCCTCACATCTATTGGACACCATGTGTGGTTCACACACTTAATCTTTCTTTGAAAAACATATGTGCCGCAAAAAATGTGGAAAACAATCAAGATGTGTATGCTGAATGTCATTGGATCACCGAAATCCATGGTGATGTCATTCAAATCAAGAATTATATCATGAACCATACGATGAGATCGTCCATGTACAATAGATTTACTCCCCTTAAGTTGCTTTCTGTGGCTGATACTCGCTTTGCCTCGGTGATTGTGATGCTGAAGAGGTTTAAGCTCATTAGACGTGCTCTTGAGGCTTTGGTATTGAGTTATGAATGGGTGACTTATTGTGAGGATGACCAAGGCAAGGCTAGGCTTGTGAGGGAGAAGGTACTAAGTGAAGCTTGGTGGGAATCCTTGAATTATATTTTTAGTTTTACAGCACCTGTGTATGATATGATTAGAGCTTGTGACACCGATAAGACATGCCTTCACTTGGTGTGTGATATGTGGGATTCTATGATTGAGAAAGTCAAGAAAGAGATTTATATGCATGAAGGCTTATCTCCTCTTAGTCATAGTCTTTTCTATATGCAAATCCACAAAATTCTTGTTGCTCGTTGGGGGAAAAGCTCTACTCCACTTCATTGTCTAGCCCACTCATTGAATCCAAGGTTCTATAGTGATGCTTGGTTCAATGAGGATCCCGCTAGAGTCCCTCCTCATAGAGATGGGGAAATCGCTCAAGAAAGAATGAAATGCTTTCGAAGACTCTTCCCAAGTGATGACGATTATGACAAGGTGTTGGATGAGTTTGGTTATTTTTCTCTCAAGACGGGACCTTTCTCAGATATTACTTCTCTTTCTAGGAGGGGCACTACTGATCCTAAAACTTGGTTGGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41609.p1 GENE.S_Transcript_41609~~S_Transcript_41609.p1 ORF type:complete len:590 (+),score=91.73,DUF659|PF04937.11|1.3e-51 S_Transcript_41609:187-1956(+)
MASSGTSNPNTSSSGSVTSNTPSELGPLWQFVTKVNKSAEKGGTWRFICNFCNESKQGSYSRVKAHLLQIPRQGIAICKKVQHNDLLEMRRIDKEFEESKTNLGPQDCSGTQMESNALSKKRKSDLPPLERSFNLDARSQLDQEIARMFFSGGLPFNLARNPHYVRSYSAASHNLSGYMPPGYNKLRTTLLQQEKGNVERLLEPLKATWPEKGATLVSNGWSDPQRRPLINFMATSRNGPMFLKAVNCMGEVKSKEFIADLMKEVIDEIGHESVVQIVTDNARNCKGAGEIIEGIYPHIYWTPCVVHTLNLSLKNICAAKNVENNQDVYAECHWITEIHGDVIQIKNYIMNHTMRSSMYNRFTPLKLLSVADTRFASVIVMLKRFKLIRRALEALVLSYEWVTYCEDDQGKARLVREKVLSEAWWESLNYIFSFTAPVYDMIRACDTDKTCLHLVCDMWDSMIEKVKKEIYMHEGLSPLSHSLFYMQIHKILVARWGKSSTPLHCLAHSLNPRFYSDAWFNEDPARVPPHRDGEIAQERMKCFRRLFPSDDDYDKVLDEFGYFSLKTGPFSDITSLSRRGTTDPKTWLG*

Click here to download the sequence:
Link to NCBI Protein BLAST