Transcript Information: S_Transcript_41611.p2


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35963515182676
Replicate 21.0435103169095
Replicate 30.7476784898757
Condition 2: 8 Hour
Replicate 10.86454285069458
Replicate 20.60464455783045
Replicate 31.2962339759786
Condition 3: 24 Hour
Replicate 11.9188073336333
Replicate 20.30626772400469
Replicate 30.51125765686046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41611.p2 GENE.S_Transcript_41611~~S_Transcript_41611.p2 ORF type:complete len:148 (+),score=19.45,Dimer_Tnp_hAT|PF05699.10|2.6e-09 S_Transcript_41611:1960-2403(+)
ATGAGTATGCCCATTTTTCTCTTAAGACGGGACCTTTCTCGGATATTACTTCTCTTTCTAGGAGGGGCACTACTGATCCTAAAACTTGGTTGGGCTAATTTTGGTGCCCAAACACCAATGCTCCAATCATTAGCTTTTAAAGTGCTTGGCCAACCTACCTCTTCCTCGTGTTGTGAGCGTAATTGGAGCACTTACTCCTTCATTCACTCACTTAGGAGGAACAAGCTAACCCCTAAACGTGCCGAAGATTTAGTTTTCATCCACAACAACCTACGTCTCTTATCAAGGAGCACCGATCAATATCATGATGAGAAGACCAAGATGTGGGATGTTGGTGGAGATGAGTTTGATAATTTTGAGGATATGGGGTTTTTGGAACTTGCCGAGCTATCTCTTGATGAGCCCGTGTTGGAGAATGTGTTTTTCAATGATAATGCCGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41611.p2 GENE.S_Transcript_41611~~S_Transcript_41611.p2 ORF type:complete len:148 (+),score=19.45,Dimer_Tnp_hAT|PF05699.10|2.6e-09 S_Transcript_41611:1960-2403(+)
MSMPIFLLRRDLSRILLLFLGGALLILKLGWANFGAQTPMLQSLAFKVLGQPTSSSCCERNWSTYSFIHSLRRNKLTPKRAEDLVFIHNNLRLLSRSTDQYHDEKTKMWDVGGDEFDNFEDMGFLELAELSLDEPVLENVFFNDNAV*

Click here to download the sequence:
Link to NCBI Protein BLAST