Transcript Information: S_Transcript_4162.p1


Annotated TAIR IDAT1G20200.1
Annotated Gene NamePAM domain (PCI/PINT associated module) protein
Annotated Gene Symbol(s)EMB2719, HAP15
Annotation TypeOrtholog
Chromosome Positionchr1:7001409-7004154 | Reverse length=488
E-Value3.2E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.655132368109
Replicate 246.643614879746
Replicate 343.901730459875
Condition 2: 8 Hour
Replicate 146.243645307261
Replicate 244.986869547276
Replicate 346.91803413053
Condition 3: 24 Hour
Replicate 138.822157072958
Replicate 241.386090704634
Replicate 339.615058875427


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4162.p1 GENE.S_Transcript_4162~~S_Transcript_4162.p1 ORF type:3prime_partial len:184 (+),score=39.11 S_Transcript_4162:188-736(+)
ATGACGCAAGACGTGGAGATGAAGGAAACTCAACTTCCTTCCAATTCTCTCTCCTCGACCGATCCACACACCACTCTCAAGCATTTGAAGGAAATAGCGGCTCTAATGGAGACAGGCTCGTACACAAAGGAAAGTCGTCGAATTTCTCGAGCGATTCGACTCACCTTTGGGGTTCGCCGTAAGCTTACATCTCGTGTTCTGTCGTTTTTCCTTGATTATGCTCTTGCTCCATCTTCTGAGGCTCATTCCAAGTTGTCTGCTTTTCTTCCTAAGGGAGGTGAGCATGAGATGGAAGTTGACACTGCAACATCTGCTTTGCAATCTCCAGTGAAAAGCACATTGCCAGAGCTGGAAATTTATTGCTACTGGCTTGTGTTATTGTTCCTGATTGATCAGAAAATGTATAATGAGGCAAAAGCTTGTGCTTCTGCAAGCATTGCCCGTTTGAAGTCCTTGAAGAGGAGGATCACCGATGTTTTAGCGTCCAAATTGTATTCCTTCTATTCATTGAGTTATGAGCTTACTGGGGATTTTGCTGAAATTCGTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4162.p1 GENE.S_Transcript_4162~~S_Transcript_4162.p1 ORF type:3prime_partial len:184 (+),score=39.11 S_Transcript_4162:188-736(+)
MTQDVEMKETQLPSNSLSSTDPHTTLKHLKEIAALMETGSYTKESRRISRAIRLTFGVRRKLTSRVLSFFLDYALAPSSEAHSKLSAFLPKGGEHEMEVDTATSALQSPVKSTLPELEIYCYWLVLLFLIDQKMYNEAKACASASIARLKSLKRRITDVLASKLYSFYSLSYELTGDFAEIRG

Click here to download the sequence:
Link to NCBI Protein BLAST