Transcript Information: S_Transcript_416796.p1


Annotated TAIR IDATMG00310.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)ORF154
Annotation TypeHomolog
Chromosome PositionchrM:90883-91347 | Reverse length=154
E-Value7E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31871857766683
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.25539389601357
Replicate 20.26792633101469
Replicate 30.38291941805356
Condition 3: 24 Hour
Replicate 10
Replicate 20.13571144656495
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_416796.p1 GENE.S_Transcript_416796~~S_Transcript_416796.p1 ORF type:internal len:167 (+),score=21.44 S_Transcript_416796:3-500(+)
TCTTTGTGCTTGCCCAAGTCTTTAGGTGGCATGGGGTTTCGGGACTTGAAGGTCTTTAATCAAGCACTACTGGCCAAGCAAGCGTGGCGGCTGGTGGTGGGAGGCGATACCCTTCTCTATAGGATTCTAAAAGCGAAATACTTTAAAAATACTAACCTTCTAGAAGCTTATCGAGGGGCTGATCCAAGTTTTACATTGAGGTCCATTTGGGGGGCGAAATCCCTTCTTATGGAAGGTCTCAAGTGGAGAGTTGGGGATGGGAAGAAGATTAAAGTATGGGAGGATGCTTGGTTGCCAGGCAATAATCCTTATGATGTACCACATCAGCTTGTGGATTGTGACCCTGACCTGATGGTCCATAATCTTATTGAACAAGAAAAAAGAGAGTGGAATATGGCAAAGCTAGTTGACACTTTTTACGCAGCCGATGTCATCAAAGTATGCTCAATTCCTCTAAGTTGCTTTCCACGACAGGACATATGCTATTGGTGGCCTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_416796.p1 GENE.S_Transcript_416796~~S_Transcript_416796.p1 ORF type:internal len:167 (+),score=21.44 S_Transcript_416796:3-500(+)
SLCLPKSLGGMGFRDLKVFNQALLAKQAWRLVVGGDTLLYRILKAKYFKNTNLLEAYRGADPSFTLRSIWGAKSLLMEGLKWRVGDGKKIKVWEDAWLPGNNPYDVPHQLVDCDPDLMVHNLIEQEKREWNMAKLVDTFYAADVIKVCSIPLSCFPRQDICYWWPS

Click here to download the sequence:
Link to NCBI Protein BLAST