Transcript Information: S_Transcript_416813.p1


Annotated TAIR IDAT1G62040.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8C
Annotation TypeOrtholog
Chromosome Positionchr1:22932782-22934253 | Forward length=133
E-Value1.8E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36707587910594
Replicate 20.45647150808651
Replicate 30.12719128333518
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.29401169110319
Condition 3: 24 Hour
Replicate 10.15065436890065
Replicate 20.31260429760479
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_416813.p1 GENE.S_Transcript_416813~~S_Transcript_416813.p1 ORF type:complete len:145 (+),score=6.50,Atg8|PF02991.12|1.1e-48,APG12|PF04110.9|1.7e-06 S_Transcript_416813:59-436(+)
ATGGCTCAGTCAGATAAATCATTCAAGGAGGAGCACCCGCTAGCCAAGCGCAAGGCGGAGGCGCAAAGGATTCGAGAGAAGTTCACGGACCGCATTCCGGTCATCGTCGAGAAGGCGCCCCGAAGCGACATCCCTGACATTGACAAGAACAAGTACTTGGTGCCTGCAGATCTCAGCGTAGGACAGTTCGTATATGTTATCCGCAAACGCATACAGCTACCATCAGAGAAGGCTATCTTCATTTTCGTGAAGAACACCTTGCCACCGATTGCTGCGATGATGGCAACTGTGTATGAGGAGCACAAGGATGAAGATGGCTTTTTGTACATCACATACAGCGGTGAAAACACGTTTGGGGGCTATTCGTGCGCGCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_416813.p1 GENE.S_Transcript_416813~~S_Transcript_416813.p1 ORF type:complete len:145 (+),score=6.50,Atg8|PF02991.12|1.1e-48,APG12|PF04110.9|1.7e-06 S_Transcript_416813:59-436(+)
MAQSDKSFKEEHPLAKRKAEAQRIREKFTDRIPVIVEKAPRSDIPDIDKNKYLVPADLSVGQFVYVIRKRIQLPSEKAIFIFVKNTLPPIAAMMATVYEEHKDEDGFLYITYSGENTFGGYSCAR*

Click here to download the sequence:
Link to NCBI Protein BLAST