Transcript Information: S_Transcript_417298.p1


Annotated TAIR IDAT5G28500.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in 49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10477810-10479114 | Forward length=434
E-Value2E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.653545341721
Replicate 253.778049546442
Replicate 362.776236284564
Condition 2: 8 Hour
Replicate 179.560110029304
Replicate 283.571761505133
Replicate 393.564273381481
Condition 3: 24 Hour
Replicate 149.991175680398
Replicate 257.531214001497
Replicate 352.141726414423


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_417298.p1 GENE.S_Transcript_417298~~S_Transcript_417298.p1 ORF type:internal len:208 (-),score=46.92 S_Transcript_417298:3-623(-)
AGGTCAAATTACTTGGGTACAATAAAAAGGCTATGTTATCCCAAAATTAACCCAGCTACAACCATTATCTCATCCTCCTCTTCTTTGAGCTCAAACCCCCCACCTCTAGTCCCAAACCTCATCATCCCAAAAAACTCTTCACCAACCCCAACTCCCCAAAACCTATACCAGCCATACCGGCCTCCTCAATCCCCTCCCCCTCAGAAATACAAGAACCTTGACACTGCCTCCATCATTGAAGTCCTTTCCAACAGACTAGGCCTCTGGTTTGAATATGCTCCTCTGATATCAACCCTCTTTCGCGACGGTTTTACTCCTCCTTCTATTGAGGAACTCACTGGTATCTCCGGGGTTGAACAAAACCGCCTTGTTGTTGGTGCCCAAGTCAGGGAATCCATTGCTGAGTCCCCTGGCATTGATCCTCAGGTTCTTGCATATTTTGACAGTGGTGGCTCTGAGATTCCTTATGAACTTAGGCTACTTAATGCCTCTCAAAGAGCTGCCGCTGCTACTTATGTTGTGAATAATAAGCTTGATGGTGAAAAGGCTAGGGACATTGCTAGAGCTATCAAGGATTTCCCTTCAAGGCAATTGGTTCCTTGTTGGTCTAAGTTTGATTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_417298.p1 GENE.S_Transcript_417298~~S_Transcript_417298.p1 ORF type:internal len:208 (-),score=46.92 S_Transcript_417298:3-623(-)
RSNYLGTIKRLCYPKINPATTIISSSSSLSSNPPPLVPNLIIPKNSSPTPTPQNLYQPYRPPQSPPPQKYKNLDTASIIEVLSNRLGLWFEYAPLISTLFRDGFTPPSIEELTGISGVEQNRLVVGAQVRESIAESPGIDPQVLAYFDSGGSEIPYELRLLNASQRAAAATYVVNNKLDGEKARDIARAIKDFPSRQLVPCWSKFDY

Click here to download the sequence:
Link to NCBI Protein BLAST