Transcript Information: S_Transcript_4175.p1


Annotated TAIR IDAT4G34530.1
Annotated Gene Namecryptochrome-interacting basic-helix-loop-helix 1
Annotated Gene Symbol(s)CIB1
Annotation TypeOrtholog
Chromosome Positionchr4:16498466-16499946 | Forward length=335
E-Value6E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1110.50303261288
Replicate 298.139765811863
Replicate 3112.02110098982
Condition 2: 8 Hour
Replicate 167.357575335722
Replicate 265.081741497387
Replicate 349.166151663921
Condition 3: 24 Hour
Replicate 154.773851627579
Replicate 247.196309519455
Replicate 359.509094198963


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4175.p1 GENE.S_Transcript_4175~~S_Transcript_4175.p1 ORF type:complete len:473 (+),score=88.36,HLH|PF00010.22|2.6e-07 S_Transcript_4175:281-1699(+)
ATGAATAGAGCTTTGCCGGAGTTGCTACACTGTCCAAATATGCCGGGAAGTATTACTGGAGTTAAGGGTATGGAGATGAGTGTGCTGGAAAGGCAGAGACTGGTTCTCAAGCTGCAACAAGAGCAACTTCTCCAGTTCCAGCCACACCAAGATCAGAGCTGCTTTAATGAACTGAGCATGCTGTCTTCCCTACCAGCTCAAGCACAAAATTTTCAGGGCCTGAATATGGATGGTTGCCCAAACAGAGTCACGGCTGACCCAACTTTAAACAAGCTTCTGGCCCGACCCATCAAAGCTGACCCGGGTATGGACAACAATTGGATGGATTTTGGGATGCCAAAAAGTGGGGTCAATATGGAAAATTCAGTTGTTGAGTCTATTGAGCAAGTCAACAATTCTGGATATGGTGCGAATTATGCCATTTCAAGAACCGCCAGTTGCCCACCATTGGTGGCCGCAGCTGTCATGAAGGCGGCAACAGAAACCAAAGGAAGAGAATCTCCTACAACAACCCAGAAGCTTAGTGCACCCACTGGGAGAGAGAGTTTAAAGAAAAGGAAGGCAGAAAGGAACCAGACACAAAAGGGGGATTCTGAACAAGATAGCAGATCAAAGAAGAGCAAGGGATGTGTAGAAGAGGAAGAATCAAAGATCACAGAGCAAAATAGCAACAGAATCAGCAATAGCAGCCATAGCAACCAAAAAGAAAGTAATGGCAATGACAGTGACAACAAAAACAGAGATGCTTCAGTGTGTACATCCAAGAATAACTCAAAGGCCTCTGAGGTCCAGAAGCCTGATTACATTCACGTCAGAGCACGGCGTGGCCAGGCCACTGATAGTCACAGCTTAGCTGAAAGAGTAAGGAGGGAGAAAATCAGCGAAAGAATGAAATATCTGCAAGATCTAGTTCCTGGGTGCAACAAGATCACAGGGAAAGCTGGAATGCTCGATGAAATAATCAATTATGTCCAATCTCTTCAAAGACAAGTCGAGTTCCTTTCCATGAAATTGGCAGCTGTAAATCCCAGGCTTGATTTCAACATAGACGATTTAATTGCCAAAGAGGTATTCGCGGCATGCTCAACCAGTATACCAGCAATGGGGATATCAACAGATATGACTAATCCCACCTACTTACATTACAATCCAATCCAACAGATGGATCCGGTTTGTGTATCCGAAGTCACAGTGAACCCAATTGATATGGGGCTGCGAAGGAGCATTAGTGCCCCAACATCAGTACCAGAGACCTTCACTGATTTATCCTGCTTCAATCAAATTCCAAGTTCTTTACCATGGGATGCTGATTTACAAAATATCTACACAATGGAATTTCAACAAGGAAGATCATTAGCATTTCCATTACAGACATTCACAGGCACTATCGAGGCTAGCAGTTTAAAGATGGAGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4175.p1 GENE.S_Transcript_4175~~S_Transcript_4175.p1 ORF type:complete len:473 (+),score=88.36,HLH|PF00010.22|2.6e-07 S_Transcript_4175:281-1699(+)
MNRALPELLHCPNMPGSITGVKGMEMSVLERQRLVLKLQQEQLLQFQPHQDQSCFNELSMLSSLPAQAQNFQGLNMDGCPNRVTADPTLNKLLARPIKADPGMDNNWMDFGMPKSGVNMENSVVESIEQVNNSGYGANYAISRTASCPPLVAAAVMKAATETKGRESPTTTQKLSAPTGRESLKKRKAERNQTQKGDSEQDSRSKKSKGCVEEEESKITEQNSNRISNSSHSNQKESNGNDSDNKNRDASVCTSKNNSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDDLIAKEVFAACSTSIPAMGISTDMTNPTYLHYNPIQQMDPVCVSEVTVNPIDMGLRRSISAPTSVPETFTDLSCFNQIPSSLPWDADLQNIYTMEFQQGRSLAFPLQTFTGTIEASSLKMEM*

Click here to download the sequence:
Link to NCBI Protein BLAST