Transcript Information: S_Transcript_41777.p1


Annotated TAIR IDAT1G27650.1
Annotated Gene NameU2 snRNP auxiliary factor small subunit, putative
Annotated Gene Symbol(s)ATU2AF35A
Annotation TypeOrtholog
Chromosome Positionchr1:9615152-9616042 | Forward length=296
E-Value2.1E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.254712350338
Replicate 226.289103141584
Replicate 323.352815170793
Condition 2: 8 Hour
Replicate 128.941601144681
Replicate 228.981713010555
Replicate 325.675907342364
Condition 3: 24 Hour
Replicate 121.773958544196
Replicate 219.941210835033
Replicate 320.881887413327


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41777.p1 GENE.S_Transcript_41777~~S_Transcript_41777.p1 ORF type:complete len:308 (+),score=38.83,zf-CCCH|PF00642.20|2.9e-07,zf-CCCH|PF00642.20|0.00069,RRM_5|PF13893.2|3.2e-08,RRM_1|PF00076.18|4.2e-07 S_Transcript_41777:99-926(+)
ATGGCGGAACACTTGGCCTCAATCTTCGGGACCGAGAAAGACAGAGTAAACTGCCCCTTCTACTTTAAGATCGGCGCGTGTCGTCACGGCGACAGATGCTCGCGTCTCCACAACCGCCCCACAATCTCCCCAACACTCCTTCTCTCCAACATGTACCAACGCCCCGACATGATAACACCAGGAGTCGACGCGCAAGGACAACCCATCTCCCCACGCGCTCTCCAATCTCACTTCGAGGACTTCTACGAGGACATATTCGAGGAGCTCTCCAAGTTCGGCGAGATCGAAACCCTAAATGTTTGCGACAACCTCGCCGACCATATGATTGGGAATGTTTATGTCCAGTTTAGGGAAGAGGATCAAGCTGCTGCCGCCTTGCAGGCTCTTCATGGGAGGTTTTATTCGGGACGGCCGATAATTGCGGATTTTTCGCCGGTGACGGATTTTAGGGAGGCCACGTGTCGGCAGTTTGAGGAGGAGAGTTGTAATCGGGGTGGGTATTGTAATTTTATGCATGTTAAGATGATTGGGAGGGAGTTGAGGAGGAAGTTGTTTGGGAGGTATCATAGAGGTGGTGGTGGTGGGAGGAGGAGGAGTCGGAGCCGGAGTCGAAGTCCGAGGAGAGATAGAGAGAGGGACTATGATCATCGGAGAGATAGGGATTACGGTCGGAGAGGGAGTCGAGATAGGGACCGAGGAGAGAGAGATGGTGGAAGGGGTGGTGGGGGAAGGAGGAGGAGTAGGAGTCCTCCGGCTGCAAGGGAAGGGAGCGAGGAACGGAGGGCTAGGATCGAGCAGTGGAATCGAGAGAGGGAGGGCAGAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41777.p1 GENE.S_Transcript_41777~~S_Transcript_41777.p1 ORF type:complete len:308 (+),score=38.83,zf-CCCH|PF00642.20|2.9e-07,zf-CCCH|PF00642.20|0.00069,RRM_5|PF13893.2|3.2e-08,RRM_1|PF00076.18|4.2e-07 S_Transcript_41777:99-926(+)
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPISPRALQSHFEDFYEDIFEELSKFGEIETLNVCDNLADHMIGNVYVQFREEDQAAAALQALHGRFYSGRPIIADFSPVTDFREATCRQFEEESCNRGGYCNFMHVKMIGRELRRKLFGRYHRGGGGGRRRSRSRSRSPRRDRERDYDHRRDRDYGRRGSRDRDRGERDGGRGGGGRRRSRSPPAAREGSEERRARIEQWNREREGRE*

Click here to download the sequence:
Link to NCBI Protein BLAST