Transcript Information: S_Transcript_417948.p1


Annotated TAIR IDAT5G61400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24681550-24683514 | Forward length=654
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.31797820833794
Condition 2: 8 Hour
Replicate 10
Replicate 20.19286076413557
Replicate 30.36751461387899
Condition 3: 24 Hour
Replicate 10.37663592225162
Replicate 20.19537768600299
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_417948.p1 GENE.S_Transcript_417948~~S_Transcript_417948.p1 ORF type:internal len:116 (+),score=19.46,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|4.3e-16,PPR_2|PF13041.2|6e-16,PPR_2|PF13041.2|0.00024,PPR_1|PF12854.3|4.3e+02,PPR_1|PF12854.3|1.4e-07,PPR_1|PF12854.3|5.4e-09,PPR_1|PF12854.3|1.4e-07,PPR|PF01535.16|14,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.00034,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|0.00033,PPR_3|PF13812.2|8.3e-05,PPR_3|PF13812.2|3.6 S_Transcript_417948:2-346(+)
GAAAAAGCTCTGGAGTTGTGTTCACAAATGATGCAAGAGGGTATACAACCAAATGTCGTTACTTTCGCTTCCCTCATACATGGTTATAGTCAAGCCAGGGATATGGAGGCTGCAATGGGAATATATACAGAAATGATAATCAAAGGTGTTTCACCTGATGTTGTCACCTACACAGTTTTACTGGATGGGCATTTCAAAAATGCAGATACAAAGACTGCTCTTCAGATGTACAGAGAAATGCGAGACGCTGGACTCATCCCTAATGCTTTCACCATCAGTTGTGTAATTGATGGACTGTGCAAAGATGGATATCTAAATAAAGCCTTCAAGATATTCCTGGAATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_417948.p1 GENE.S_Transcript_417948~~S_Transcript_417948.p1 ORF type:internal len:116 (+),score=19.46,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|4.3e-16,PPR_2|PF13041.2|6e-16,PPR_2|PF13041.2|0.00024,PPR_1|PF12854.3|4.3e+02,PPR_1|PF12854.3|1.4e-07,PPR_1|PF12854.3|5.4e-09,PPR_1|PF12854.3|1.4e-07,PPR|PF01535.16|14,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.00034,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|0.00033,PPR_3|PF13812.2|8.3e-05,PPR_3|PF13812.2|3.6 S_Transcript_417948:2-346(+)
EKALELCSQMMQEGIQPNVVTFASLIHGYSQARDMEAAMGIYTEMIIKGVSPDVVTYTVLLDGHFKNADTKTALQMYREMRDAGLIPNAFTISCVIDGLCKDGYLNKAFKIFLEL

Click here to download the sequence:
Link to NCBI Protein BLAST