Transcript Information: S_Transcript_418407.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88710004117268
Replicate 20.47277406194675
Replicate 30.3512902111162
Condition 2: 8 Hour
Replicate 10.81239582160507
Replicate 20.53266306285063
Replicate 30.50752018107098
Condition 3: 24 Hour
Replicate 10.57212790094413
Replicate 20.86338329814657
Replicate 30.66057735346733


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_418407.p1 GENE.S_Transcript_418407~~S_Transcript_418407.p1 ORF type:complete len:420 (+),score=55.35,RVT_1|PF00078.23|1.8e-40 S_Transcript_418407:2922-4181(+)
ATGAATTTCATGCTTGATCAAGAGCCCACTCAAGAGGAAATTTATTCATCCCTCAAGCAAATGCACCCCAAAAAGGCTCCGGGACCGGATGGAATGCACAAATTATTTTTTAAGAAGTTTTGGCATATAGTGGGGCATAGCGTGGTCAATTTTGTTTCTGCTTGGTGGAGAGGCGAAGTGGAGCTTACTGAGGTAAATGCTACTAATATTGTCCTTATCCCTAAAGTTAAGGAACCAAAATACATTACAGAGTTCCGCCCTATTAGCCTTTGTAATGTGCTCTATAAGATTATTTCTAAAACTCTTGCAAATAGACTCAAAGGCATCCTACCTTCGTTGATATCGGAGAATCAAAGCGCATTTATTCCTGGAAGATTAATAACAGATAATGCCTTAATCGCCTTTGAGGTGTTCCATGCGCTTAAGAACAAAAGGAGGGGTCGGAAAGGTTCTTTTGCACTAAAACTTGACATGAGTAAAGCTTATGACAGAGTTGAGTGGAGGTTTTTAGAGAAAATGATGCACAAGTTCGGCTTTAGTGAGCTATGGGTGTCCAGAATATTGAAATGCCTCTCTACCGTCTCTTTCTCTTTCCTTATCAATGGGAAAGCATGTGGACGGGTTTCACCCTCACGAGGCCTTCGACAAGGGGACCCCATCTCCCCCTATTTATTTATCTTATGTGCTGATGCTCTTTCTTTAATGCTTTCTAGTGCAGCAAATAATGGGATCATCCATGGAGTCAAAGTGTGCCGAGGGGCACCATCGGTTTCTCACCTGTTTTTTGCCGACGACGGTATCTTCTTTGCTAGAGAAAATGTCCAGGAATGTAAGCAGGTAACTAAGCTTATCCACATGTATGAGCAAGCATCGAGGCAAAAGGTTAACTTTGAGAAATCAGAGGTTACCTTTGGAGCTAATGTGCCAAGGGCGATCCGAGATGATATTGTTCGTGAACTGGGGGTCAAAGAAGTGAACAAACATGAAAAATATTTGGGACTACCAACTATCATTGGAAGATCAAAGAAGGCAGTTTTGGGCTGCATTAAGGATCGAGTATGGAAGAAGTTTCAAGGTTGGAAAGAAAAATTGCTCTCCAAGCCGGGGAAAGAAATCCTTATCATGGCGGTTGCACAAGCTATTCCAACATATATTATGAGTATATTTAAACTTCCGGATGGGCTTTGTGATGAGATTAATTCTTTGATGGCAAGGTTTTGGTGGGAAGGTGATGAGGAGAGAAGGAAGGTGTATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_418407.p1 GENE.S_Transcript_418407~~S_Transcript_418407.p1 ORF type:complete len:420 (+),score=55.35,RVT_1|PF00078.23|1.8e-40 S_Transcript_418407:2922-4181(+)
MNFMLDQEPTQEEIYSSLKQMHPKKAPGPDGMHKLFFKKFWHIVGHSVVNFVSAWWRGEVELTEVNATNIVLIPKVKEPKYITEFRPISLCNVLYKIISKTLANRLKGILPSLISENQSAFIPGRLITDNALIAFEVFHALKNKRRGRKGSFALKLDMSKAYDRVEWRFLEKMMHKFGFSELWVSRILKCLSTVSFSFLINGKACGRVSPSRGLRQGDPISPYLFILCADALSLMLSSAANNGIIHGVKVCRGAPSVSHLFFADDGIFFARENVQECKQVTKLIHMYEQASRQKVNFEKSEVTFGANVPRAIRDDIVRELGVKEVNKHEKYLGLPTIIGRSKKAVLGCIKDRVWKKFQGWKEKLLSKPGKEILIMAVAQAIPTYIMSIFKLPDGLCDEINSLMARFWWEGDEERRKVYW*

Click here to download the sequence:
Link to NCBI Protein BLAST