Transcript Information: S_Transcript_41852.p1


Annotated TAIR IDAT3G03710.1
Annotated Gene Namepolyribonucleotide nucleotidyltransferase, putative
Annotated Gene Symbol(s)RIF10, PNP
Annotation TypeOrtholog
Chromosome Positionchr3:919542-924906 | Forward length=922
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.135540851647
Replicate 225.03460927162
Replicate 326.59092767226
Condition 2: 8 Hour
Replicate 125.117081483434
Replicate 225.602266438997
Replicate 326.415112872552
Condition 3: 24 Hour
Replicate 118.902415348003
Replicate 219.5866130218
Replicate 319.786258972979


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41852.p1 GENE.S_Transcript_41852~~S_Transcript_41852.p1 ORF type:complete len:928 (+),score=225.08,RNase_PH|PF01138.17|4.4e-14,RNase_PH|PF01138.17|1.2e-22,RNase_PH_C|PF03725.11|5.5e-16,RNase_PH_C|PF03725.11|1.9e-06,S1|PF00575.19|6.6e-12,PNPase|PF03726.10|0.019,PNPase|PF03726.10|0.00018,KH_1|PF00013.25|7.2e-07 S_Transcript_41852:214-2997(+)
ATGATGTTAGCAAACCCTATCACAAATGCTAGTTGCAGTCCTTACCCTTCTTGTATACAACATTCACATCCATTCTTTTTCTTACATTCTAAGAACTCCAAACTTGCTTATAGTAGTAGAACCTTCAATAATAAGACCCCTTCACTTAATTTGCTTCTTCCTAGGAATTTTAATTGTAAAAGGTTCCAGTTTAAAGCTTTGTCTGAAACCCATGTTTCTGACAATTCCCAAGATGCCCCTCAGCCTTACTCTGTCAAAATCCCTGTTGGGGATAGACATATCTTGGTGGAGACAGGTCACATTGGTAGACAAGCTAGTGCTGCTGTTACAGTGACAGATGGTGAAATGATTGTCTATACAACTGTTTGTCTGTCTGATATTCCAAGCGAGCCATCTGATTTTTTCCCTCTTTCTGTAAACTACCAAGAGCGGTTTTCAGCAGCGGGTCGAACAAGTGGAGGTTTTTTCAAACGAGAAGGGAGGACAAAAGATCATGAGGTCCTTGTCTGTAGATTGATTGATCGGCCTATACGTCCTACTATGCTTAAGGGCTTCTACCATGAAACTCAGATCTTATCTTGGGTTTTGAGTTATGATGGCCAACATGCTCCTGATGCTTTAGCAGTGACGGCAGCTGGAATAGCAGTAGCTCTCTCTGAATTGCCTCATACGAAGCCAGTTGCTGGAGTTCGTGTTGGACTTGTTGATGGGAGGTTTATTGTAAACCCTACTACTAAAGAAATGGAGGACTCAGAGTTGGATCTGGTACTTGCAGGCACAGATAGTGCTATCTTGATGATTGAGGGCTATTGTGATTTTCTTCCAGAAGAGAAGTTGCTGCAAGCCGTAGAAGTTGGACAGAACGCAGTGCGAGCAATTTGCAAGGAAGTGGAGTCCTTAGTTATAAAGTGCGGGAAACCTAAATTGTTTGATGCAATAAAATTGCCCCCTCCAGAGCTGTATAGGCATGTTGAGGAAATTGCGGGGGATGAGTTAGTTCATGTACTGCAAATAAAAAAGAAAATACCGAGACGGAAGGCACTTGCATCTTTGGAAGAGAAAGTTGTGGATATTCTTACTCAGAGGGGCTATGTTGGAAAGAGTGAAGCTGTTGTAATTACTGAGACTGTGCCAGATTTGTATGTTGACGATGATGAGGATGAGGAGGTGGTTGTTGATGGTGAAGTTGATGAAGGAGATGTTCACATAAAGCCAACTCCGAGGACTCCCACCCCATTGTTGTTCTCTGAGGTAGATGTGAAGCTAGTATTCAAAGAGATTACATCAAAGTACCTGCGGAAACGTATTGTTGAGGGAGGACGAAGAAGTGACGGCAGAACTCCAGAAGGGATACGTCCTATCAATTCTAAATGTGGATTGCTTCCCAGAGCTCACGGAAGTGCTCTTTTCACACGAGGAGAGACACAGTCACTGGCAGTTGTGACCCTTGGTGACAAGCAAATGGCACAAAGAATAGACAACCTTGAGGGAGATGATGAAGTGAAGAGATTCTATCTTCAGTATTCATTTCCGCCATCTTGTGTTGGAGAAGTTGGACGGGTAGGAGCACCTAGTAGAAGAGAAATTGGCCATGGAACACTTGCAGAGAGAGCTCTTGAACCTTGCCTGCCTTCAGAAGATGAATTTCCATACACAATACGTGTTGAGAGTAACATCACAGAAAGCAATGGTTCTTCAAGCATGGCTTCTGTTTGCGGAGGTTCTTTAGCATTACAAGATGCCGGGGTTCCTGTTAGAAGTCCTATTGCTGGGATTGCTATGGGCATGGTTCTCGATACAAAAGAATTTGGAGGTGACGGAACTCCACTAATTCTATCTGACATAACTGGGTCTGAGGATGCCTCTGGAGATATGGACTTCAAGGTTGCAGGAAATGAGGAAGGCATTACTGCATTCCAAATGGATATCAAGGTTGGAGGCATTACCTTACCTGTTATGGAGCAGGCACTTCTTCAAGCAAAAGATGGGCGGAAACTTATTCTTGCCGAGATGTCTAAAAGCTTCCCAGAACCATCAAGAAAGCTTTCTAAATATGCTCCTTTGATTCATGTGATGAAAGTCAGGCCCGAGAAGATTAATCTCATCATTGGCAGTGGAGGAAAGACAGTAAGGAGCATTATTGAAGAAACTGGAGTAGAAGCAATTGACACGCTGGACGATGGAACTGTGAAAATTACTGCAAAGGATGTGATGAGCATTGAGAAGTCAAAGGTCATCATTGGTAATCTGACAATGGTTCCTACGATTGGGGATATATATAGGAACTGCGAAATTAAATCAATTGCTCCTTATGGAGTTTTTGTTGAGATAGCACCTGGACGTGAGGGACTTTGCCACATAAGTGAATTGAGTCCCAGTTATCTAGCAAAAGCAGAAGATGCATTTAAAGTTGGAGATCGAGTTGATGTGAAGCTTATTGAGGTTAATGAGAAGGGCCAGCTTCGCCTCAGTCGCCGTGCACTGATCCCTGATACGGATCCTCTGGTACCCAGCACAAAGCCACGACCGACTGCTGCTTCCAAAGAGAATTCAGGATCACAAAACACAGCTTCCAAGAGTGTTACCAAGAAAGTTACTAATCCAACGAAAGATGGTTCAACAGACGAGAAAGTTGAACTGACTAAGATCAAAGTCAATGCTTCCAAGACAAAAGGCAATTCAGAGGGTAAAGACAAACCCAAGAAGGGAAGCAAAGCTATGAATGGTACTAATTCCAGTGAAAGTCAAGGTAATCTAGTGAACGGCGAGGCTAATATTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41852.p1 GENE.S_Transcript_41852~~S_Transcript_41852.p1 ORF type:complete len:928 (+),score=225.08,RNase_PH|PF01138.17|4.4e-14,RNase_PH|PF01138.17|1.2e-22,RNase_PH_C|PF03725.11|5.5e-16,RNase_PH_C|PF03725.11|1.9e-06,S1|PF00575.19|6.6e-12,PNPase|PF03726.10|0.019,PNPase|PF03726.10|0.00018,KH_1|PF00013.25|7.2e-07 S_Transcript_41852:214-2997(+)
MMLANPITNASCSPYPSCIQHSHPFFFLHSKNSKLAYSSRTFNNKTPSLNLLLPRNFNCKRFQFKALSETHVSDNSQDAPQPYSVKIPVGDRHILVETGHIGRQASAAVTVTDGEMIVYTTVCLSDIPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPIRPTMLKGFYHETQILSWVLSYDGQHAPDALAVTAAGIAVALSELPHTKPVAGVRVGLVDGRFIVNPTTKEMEDSELDLVLAGTDSAILMIEGYCDFLPEEKLLQAVEVGQNAVRAICKEVESLVIKCGKPKLFDAIKLPPPELYRHVEEIAGDELVHVLQIKKKIPRRKALASLEEKVVDILTQRGYVGKSEAVVITETVPDLYVDDDEDEEVVVDGEVDEGDVHIKPTPRTPTPLLFSEVDVKLVFKEITSKYLRKRIVEGGRRSDGRTPEGIRPINSKCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLEGDDEVKRFYLQYSFPPSCVGEVGRVGAPSRREIGHGTLAERALEPCLPSEDEFPYTIRVESNITESNGSSSMASVCGGSLALQDAGVPVRSPIAGIAMGMVLDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNEEGITAFQMDIKVGGITLPVMEQALLQAKDGRKLILAEMSKSFPEPSRKLSKYAPLIHVMKVRPEKINLIIGSGGKTVRSIIEETGVEAIDTLDDGTVKITAKDVMSIEKSKVIIGNLTMVPTIGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSPSYLAKAEDAFKVGDRVDVKLIEVNEKGQLRLSRRALIPDTDPLVPSTKPRPTAASKENSGSQNTASKSVTKKVTNPTKDGSTDEKVELTKIKVNASKTKGNSEGKDKPKKGSKAMNGTNSSESQGNLVNGEANIG*

Click here to download the sequence:
Link to NCBI Protein BLAST