Transcript Information: S_Transcript_418521.p1


Annotated TAIR IDAT3G53540.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in 206 species: Archae - 2; Bacteria - 409; Metazoa - 304; Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19846805-19850670 | Reverse length=924
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8353856889967
Replicate 21.0882990364693
Replicate 31.5713541954637
Condition 2: 8 Hour
Replicate 11.9125910598326
Replicate 22.2070882066098
Replicate 32.2940822534509
Condition 3: 24 Hour
Replicate 10.48979559395951
Replicate 21.016314420464
Replicate 31.2441367195349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_418521.p1 GENE.S_Transcript_418521~~S_Transcript_418521.p1 ORF type:internal len:223 (-),score=47.66 S_Transcript_418521:1-666(-)
GAAATGCTTGCTGTCCCTGAGGTGGACATAAGACCACGGAGTCCTGATTCTGTAGTTGCGCCAGATGAGTTCTTACAAAGATTTGGGGGCAATGATGGAATTTCACAATCGAGTGTTCCCTTGGGTATTAGCAGTAGAGATGGCTGGAAGGATGAATGTATTCGGAGCTTGTCAAACTCTAGGTCCCTTCAAGCTTCTTATCATCTTGGAAGTCCTAAATCCTGCAGGAGGCTTGAAGCAAACATTGCACAAAGGTGTCTGGTCGGAAAAGAAAGAACTGATCATGGTGCAGCAATCAGGACAGATTCTAAGGGAAAAGAAGGGTCATTTTCTGAAAGTATGAAATCCTGTAACAAAAAATTTCAGTCTTCTCATCATGCAAGTGTGGAAATAATACAAGATACACATGAAGCCCAGTTCAGCAGGGGCATGATGGCTAAAAGCCCTGGTGGAAGGGATTCATCTGACATAAAGGATGTTATATTCGATATGTCATCTTGCAGACATGGCACTAATTTATCCTGCAATACAGTGATGGACAAGGAGCAAATAAAGGACTGCGATTCTTTGAATTACCCTGATGAACAGCTTCTTGCGTCAGGGTTACCCTGCATTACCCCAGATGATTCCTCGCAATCCGACCTGCCAGTGCCATCTGGACTAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_418521.p1 GENE.S_Transcript_418521~~S_Transcript_418521.p1 ORF type:internal len:223 (-),score=47.66 S_Transcript_418521:1-666(-)
EMLAVPEVDIRPRSPDSVVAPDEFLQRFGGNDGISQSSVPLGISSRDGWKDECIRSLSNSRSLQASYHLGSPKSCRRLEANIAQRCLVGKERTDHGAAIRTDSKGKEGSFSESMKSCNKKFQSSHHASVEIIQDTHEAQFSRGMMAKSPGGRDSSDIKDVIFDMSSCRHGTNLSCNTVMDKEQIKDCDSLNYPDEQLLASGLPCITPDDSSQSDLPVPSGLE

Click here to download the sequence:
Link to NCBI Protein BLAST