Transcript Information: S_Transcript_41877.p1


Annotated TAIR IDAT2G25290.1
Annotated Gene NameOcticosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)Phox1
Annotation TypeOrtholog
Chromosome Positionchr2:10766192-10768517 | Reverse length=745
E-Value8.1E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.061555044857
Replicate 229.847928349447
Replicate 327.111558770033
Condition 2: 8 Hour
Replicate 118.145039164645
Replicate 217.903436794242
Replicate 315.951406596537
Condition 3: 24 Hour
Replicate 130.978429983333
Replicate 227.49232003469
Replicate 324.046582948153


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41877.p1 GENE.S_Transcript_41877~~S_Transcript_41877.p1 ORF type:complete len:751 (+),score=216.60,TPR_11|PF13414.2|3.3e-12,TPR_11|PF13414.2|0.00064,TPR_11|PF13414.2|4.5e+02,TPR_11|PF13414.2|11,PB1|PF00564.20|1.6e-12,TPR_1|PF00515.24|0.014,TPR_1|PF00515.24|3.6,TPR_1|PF00515.24|23,TPR_1|PF00515.24|9.3e+03,TPR_1|PF00515.24|2.5e+02,TPR_1|PF00515.24|98,TPR_1|PF00515.24|4.3e+03 S_Transcript_41877:801-3053(+)
ATGGGAAAGCCAACTGGTAAGAAAAAGCCTGAAGCTTCAGCTTCAAAGCAAGGCAGTAGTGCTCTTAAGCTGAGCAAAGCCTCAAAAGCTTTTGATGAAGATACAGCAGTCTTCATAACTATGTCACAAGAGCTTAAGGATGAAGGTAACAAGTTGTTTCAAAAACATGACCATGAAGGGGCCATGTTGTTGTATGAAAAGGCTCTCAAATTGCTTCCTAGTAACCATATAGATGTAGCAAGTTTGAGGACTAGTATGGCTGCTTGTTTTATGCAAATGGGAATAGGGGAGTATCCAAGAGCGATAAACGAGTGTAATATGGCCTTGGAAGTTGCCCCTAAGTATAGCAAGGCTTTGTTGAGGAGGGCCAAGTGTTTTGAGGCCTTGAATAAGTTGGATTTAGCTTGGAGGGATGTTAGTTTTGTGTTGAATATGGAACCGAATAATCAGAACGCGTTGGAGATAAGTGATGGCTTGAAGAAGACTATGGAGGAGAAGGGTATTAAGGTGGAGGACATAACTATTGCATTGGCTCCTGAGATTGTGTCCCCTGGTGGGACTCAATCGCGTAAAATTGTGAAAGAGAAGAAGCCACAAAAGGAGAAAACATCGTCGAAGAAGAAGAGGAGGAGCCTTAGAGTTGAGGATGCTAAACCTGAACCTAAACCTGAACAAGCTGAGGAGGTGAAGATGGTGGATGAACCTAAACTTAAACAAATTGAGGAGGTGAAAATGAAGGTGGTTAAGTCGAAATCTAAGTATGTTGAGAAGCATAGGTCTAGAAGACCTAAGCATGATGAGGAGGATAGGTCTACACCTCAAGATAAGGAGGTTGTGCAAGAGAAGGTGAGGGTTAAGGAAGAGAAAGCAGTCACCAGGACAGTGAAGTTAGTTTTTGGTGATGATATTAGATGGGCTGAATTACCTCTCAAGTGTAGCGTTATGTTGATGATGGATGTTGTGCGCAACAGGTTTCCGAATTTGGAGGGTACCCTTGTTAAATATCAGGATCAAGAAGGTGATTTGGTCACTATTACTACCACTGATGAACTGAGGAAAGCTGAAGCATCAGGTATCTCACATGGTTCTCTCAGGCTGTACATTTCAGAAGTTAGTCCTGATCAGGAACCAGCTTATGATGGTGGGGGTAATAGGGAAGTCTCTAAGGCCGAAAGGAAGCCCCATGATGAGAAGAATGAAAAGCTGGGTAATGGTGACGTCAAGGAGAAGGGTTTAACTTGCATTGACAGTTGGATTATTCAATTTGCCCAACTTTTCAAGAACCATGTTGGCTTTGAATCAGATTCATACTTAGACCTGCATGAGGTTGGGATGAAGCTATACTCAGAGGCAATAGAGGAAACTGTTTCGAGTGAAGATGCACAAGAACTCTTTGACATTGCTTCAGAAAAGTTTCAAGAAATGGCAGCTTTGGCCTTCTTCAACATGGGCAATGTCCATATGTCTAAGGCAAGGAAGCATGTGTCCATTCCAGAGGATAAATCGGATGAATCAGTGCTCTTACAAATTAAATCGGCCTATGAATGGGCCAAGAAGGAGTACATTAAGGCAGGAGCAAGGTATGATGAAGCTCTTAAGATTAAGCCGGACTTCTATGAGGGTCGGGTTGCCCTTGGCCAGCAGCAATTTGAACAAGCCAAGCTTTGCTGGTATTATGCAATGGCGAATGAGGCTGATATGGAGTCTGGTGCAACTGAGGAGATCATACTACTTTACAATAGAGCTGAGGACAACATGGAAGCAGGCATGCAAATATGGGAGGAAATGGAGGAACGTCGATTGAATGGACTCTCTAAAGAAGATAATTACAAGGTCAAGCTGCAAAAACTGGGTTTGGATGGTCTGCTAAATGACGTGTCTGCAGATGAAGCTACAGAGCAGGCTGCAACTATAAGGTCACAGATATACATATTGTGGGGAACCTTGCTCTATGAACGCTCGGTTATGGAGTTCAAGTTGGAATTACCAACCTGGGAAGAATGTTTAGAGGTTGCAGTTGAGAAGTTTGAACTTGCTGGTGCTTCCCATACTGACATTACTGTGATGATCAAGAACCATTGCTCGAACCAAGCTTCACCAGCAGGTCTTGGATTCAAAATCGATGAAATTGTTCAGGCATGGCATGAGATGTATGATGCGAAAAGGTGGCAGATTGGTCTTCCTTCATTCCGGTTGGAGCCATTGTTTCGCCGGAGAGTTCCAAGGATTCATCACATCCTGGAGCATCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41877.p1 GENE.S_Transcript_41877~~S_Transcript_41877.p1 ORF type:complete len:751 (+),score=216.60,TPR_11|PF13414.2|3.3e-12,TPR_11|PF13414.2|0.00064,TPR_11|PF13414.2|4.5e+02,TPR_11|PF13414.2|11,PB1|PF00564.20|1.6e-12,TPR_1|PF00515.24|0.014,TPR_1|PF00515.24|3.6,TPR_1|PF00515.24|23,TPR_1|PF00515.24|9.3e+03,TPR_1|PF00515.24|2.5e+02,TPR_1|PF00515.24|98,TPR_1|PF00515.24|4.3e+03 S_Transcript_41877:801-3053(+)
MGKPTGKKKPEASASKQGSSALKLSKASKAFDEDTAVFITMSQELKDEGNKLFQKHDHEGAMLLYEKALKLLPSNHIDVASLRTSMAACFMQMGIGEYPRAINECNMALEVAPKYSKALLRRAKCFEALNKLDLAWRDVSFVLNMEPNNQNALEISDGLKKTMEEKGIKVEDITIALAPEIVSPGGTQSRKIVKEKKPQKEKTSSKKKRRSLRVEDAKPEPKPEQAEEVKMVDEPKLKQIEEVKMKVVKSKSKYVEKHRSRRPKHDEEDRSTPQDKEVVQEKVRVKEEKAVTRTVKLVFGDDIRWAELPLKCSVMLMMDVVRNRFPNLEGTLVKYQDQEGDLVTITTTDELRKAEASGISHGSLRLYISEVSPDQEPAYDGGGNREVSKAERKPHDEKNEKLGNGDVKEKGLTCIDSWIIQFAQLFKNHVGFESDSYLDLHEVGMKLYSEAIEETVSSEDAQELFDIASEKFQEMAALAFFNMGNVHMSKARKHVSIPEDKSDESVLLQIKSAYEWAKKEYIKAGARYDEALKIKPDFYEGRVALGQQQFEQAKLCWYYAMANEADMESGATEEIILLYNRAEDNMEAGMQIWEEMEERRLNGLSKEDNYKVKLQKLGLDGLLNDVSADEATEQAATIRSQIYILWGTLLYERSVMEFKLELPTWEECLEVAVEKFELAGASHTDITVMIKNHCSNQASPAGLGFKIDEIVQAWHEMYDAKRWQIGLPSFRLEPLFRRRVPRIHHILEHL*

Click here to download the sequence:
Link to NCBI Protein BLAST