Transcript Information: S_Transcript_418885.p2


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0471539411677
Replicate 21.5085668073514
Replicate 31.1034115605573
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.54656019499952
Condition 3: 24 Hour
Replicate 10.18670840590251
Replicate 20.77483116500333
Replicate 30.21557302910356


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_418885.p2 GENE.S_Transcript_418885~~S_Transcript_418885.p2 ORF type:complete len:117 (+),score=16.20,zf-RVT|PF13966.2|2.8e-18 S_Transcript_418885:970-1320(+)
ATGCAGGTGAGTAAGATATACGACTGGTTGCTTAACTCTCCAGCAGGTCATTACTGTACAAAAACAATCTGGGATTCAGCTGTTATTCCTAAACATCAAGTGACAGTATGGATGGTCTGGAAAAATGCTTTGCCAACTGTTGATTTGTTGTGTGCTAGGGGAATTATGTTGGTGAACAGATGTGAATTATGTCAGATAGCTCAAGAGACTCATGGTCACTTATTTTTCCAGTGTACTACTGCTTCTGCTGTTTGGAGCAGAGTGCTCAGGTGGCTTGGTTATACTAGAAGAGGGTACAGTTTATGGGGTGAATTGAGGTGGTTTTCTAAGAATGTTAGAGGCAAGGGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_418885.p2 GENE.S_Transcript_418885~~S_Transcript_418885.p2 ORF type:complete len:117 (+),score=16.20,zf-RVT|PF13966.2|2.8e-18 S_Transcript_418885:970-1320(+)
MQVSKIYDWLLNSPAGHYCTKTIWDSAVIPKHQVTVWMVWKNALPTVDLLCARGIMLVNRCELCQIAQETHGHLFFQCTTASAVWSRVLRWLGYTRRGYSLWGELRWFSKNVRGKG*

Click here to download the sequence:
Link to NCBI Protein BLAST