Transcript Information: S_Transcript_418886.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22553390877272
Replicate 20
Replicate 30.15629437358984
Condition 2: 8 Hour
Replicate 10.54217094026609
Replicate 20
Replicate 30.3612855526268
Condition 3: 24 Hour
Replicate 10.37025226255244
Replicate 20.38413239959911
Replicate 30.42749227805281


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_418886.p1 GENE.S_Transcript_418886~~S_Transcript_418886.p1 ORF type:5prime_partial len:118 (+),score=16.16,RVT_1|PF00078.23|2.6e-17 S_Transcript_418886:1-354(+)
GTGAAACATTATGGAAGAAAGAACATTTCAGCAAGAGTGGTGATTAAGGTGGGTATTAAAAAAGCATGTGACTCTGTAAATTGGGATTTTCTTCAGCAGGTCTTATTACAATATGGTTTTTGTGATACTTTGATTGATTGGATAATGGGGTGTGTGACTACCCCTTGGTATTCTCTTGGGATTAATGGAGGTGTTCATGGATATTTTAAAGGCAGGAGAGGTGTCAGACAAGGGGATCCCCTCTCCCCTTATCTTTTTGTTTTGTGCATGGAGTACTTGAGCAGATGCCTTAAAGAGTTAGATGGTAATCTTGATTTTAATTACCATCCTAGATGTGCTAAACTTAAAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_418886.p1 GENE.S_Transcript_418886~~S_Transcript_418886.p1 ORF type:5prime_partial len:118 (+),score=16.16,RVT_1|PF00078.23|2.6e-17 S_Transcript_418886:1-354(+)
VKHYGRKNISARVVIKVGIKKACDSVNWDFLQQVLLQYGFCDTLIDWIMGCVTTPWYSLGINGGVHGYFKGRRGVRQGDPLSPYLFVLCMEYLSRCLKELDGNLDFNYHPRCAKLKK*

Click here to download the sequence:
Link to NCBI Protein BLAST