Transcript Information: S_Transcript_419210.p1


Annotated TAIR IDAT5G47870.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19384555-19385808 | Reverse length=199
E-Value8.9E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1111.9621858132
Replicate 2113.42412076485
Replicate 3116.42484937357
Condition 2: 8 Hour
Replicate 1168.44240017013
Replicate 2157.9827020682
Replicate 3151.27678630672
Condition 3: 24 Hour
Replicate 1103.45043943784
Replicate 2110.0243187539
Replicate 3106.11036302593


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_419210.p1 GENE.S_Transcript_419210~~S_Transcript_419210.p1 ORF type:complete len:227 (+),score=37.32 S_Transcript_419210:75-755(+)
ATGGTCATGGCACTCCAAAACACGACGAATTTCCTGTCCAAATCGGCGGCACCGGGCTCGACGGAGATTGGATTCCCAGTTAAACTGAAGCACTCGCTGTCATGCCGCGTCTCGTTTCCTCCGGTGAGATTGTCTTGCACGCAAAGGCAGAGGCAGGGGAACTTCATCGTTGCTTCTGTAGATAACAAGAGCAGCGGCGGCGGTGGCAGCGGAAGTGGAAGCGGAAGCGGCAGCGGAAGTGCGGCTGGTGGTGGTAGTGATGCCAAGAAGGCGGCAGTTCCCAACTCAAATTACGTGGTACCACTTGATAAGGCTGCCTCTTGCATCACTCGCCCACTTGCTGAGATCCTAAGAGATCTCAACAAGAGGATTCCTGATAACATCCTCAAGCCCCATTCTAAAATCATTCCCTGGTATCATGCCAACCGGATGCTGAGTTTCTATGCCCCAGGTTGGTGTGGAGAAGTACGTGATGTCATCTTCTCTGATGATGGGAGTGTAACAGTAGTCTACCGTGTCACCATAAGAGGATCTGATGGAGAGGCATATCGTGAATCTACTGGAACAATTTTGTCCAATGACCCCAATTCTGTTGATCCAGTTGCTGCAGCAGAGGAGATTGCTTTTGTCAGGGCCTGTGCACGTTTTGGGCTTGGCTTGTATTTGTATCATGAGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_419210.p1 GENE.S_Transcript_419210~~S_Transcript_419210.p1 ORF type:complete len:227 (+),score=37.32 S_Transcript_419210:75-755(+)
MVMALQNTTNFLSKSAAPGSTEIGFPVKLKHSLSCRVSFPPVRLSCTQRQRQGNFIVASVDNKSSGGGGSGSGSGSGSGSAAGGGSDAKKAAVPNSNYVVPLDKAASCITRPLAEILRDLNKRIPDNILKPHSKIIPWYHANRMLSFYAPGWCGEVRDVIFSDDGSVTVVYRVTIRGSDGEAYRESTGTILSNDPNSVDPVAAAEEIAFVRACARFGLGLYLYHED*

Click here to download the sequence:
Link to NCBI Protein BLAST