Transcript Information: S_Transcript_41942.p1


Annotated TAIR IDAT3G30200.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:11827752-11834262 | Reverse length=510
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9014174278956
Replicate 23.4835983511865
Replicate 34.160015657955
Condition 2: 8 Hour
Replicate 16.173139302328
Replicate 26.6442708366105
Replicate 36.8915898271744
Condition 3: 24 Hour
Replicate 15.5844063058662
Replicate 24.7713287529152
Replicate 34.6461660746266


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41942.p1 GENE.S_Transcript_41942~~S_Transcript_41942.p1 ORF type:3prime_partial len:266 (+),score=44.38,Transposase_24|PF03004.10|5.6e+03,Transposase_24|PF03004.10|9.7e-08 S_Transcript_41942:315-1109(+)
ATGGAGTCAGACAAAGACCAAGAGACTTCTAATGATGTGCCAATTAAAGATGTGGTGGCAGAAATCATAAGAGGTGTCACAGCTATGAGGAAGGTCTCCAGGGCAAGAAGTCTTGGAAAAAAGCTAGTGGTCGGTTGGAATGACAACGGCCAAGTAATTGATCCAAATAAAGCAACTTTTGTTGGCTATTTAGGATTTCTTGCTCGCACTATGGTGCCAATTACCATTGCAAATTGGCGACATGTGACAGCCGTGACGAAAAAGATTATTTGGGAAGATGTTAAGTCCGCTTTTGAAGTTGATGATTCAAGAAGAAGATTTACAATGGCGGAAGTTGGTAAGCTCGCTCGCTGCTTTAGAAGTTACTTGACTCGAGCATGGGTATGTGATGAAGATGGGGGGATTAATGAGGAGCCCCCTCCACAGTATGAGATAGCAAAAGATGTATGGAATGAATTTGTGAAAAGTCGTCTAACTGATGCCTTCAAGGAGAGGAGTGCAACCAATCAGGAAAGAGCAAAAGTGCCAGAGTATCCCTGGAGGAAATCATGCACGGGGTTTGCTGTTATAACCCAAAAGCAGGAAGAGAGAAAGAAGCAAAGTGGGTCAGATTTGACGGAGGTGACACGATATTCGGTTTGGCTAGAAGGACATACTAACAGCAAGGGTGAAATTGATAATCCGAATGTGAAAAGAATAGCAGAAAAAGTTTTCCCCCGTCAGAATAACTCCGTAGATTGTGGTTACTACACTATGAGGTTCATGAACGATCTCGTCAATCACAAGGAAAATGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41942.p1 GENE.S_Transcript_41942~~S_Transcript_41942.p1 ORF type:3prime_partial len:266 (+),score=44.38,Transposase_24|PF03004.10|5.6e+03,Transposase_24|PF03004.10|9.7e-08 S_Transcript_41942:315-1109(+)
MESDKDQETSNDVPIKDVVAEIIRGVTAMRKVSRARSLGKKLVVGWNDNGQVIDPNKATFVGYLGFLARTMVPITIANWRHVTAVTKKIIWEDVKSAFEVDDSRRRFTMAEVGKLARCFRSYLTRAWVCDEDGGINEEPPPQYEIAKDVWNEFVKSRLTDAFKERSATNQERAKVPEYPWRKSCTGFAVITQKQEERKKQSGSDLTEVTRYSVWLEGHTNSKGEIDNPNVKRIAEKVFPRQNNSVDCGYYTMRFMNDLVNHKENA

Click here to download the sequence:
Link to NCBI Protein BLAST